Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02520 ATGGAAAAAAAATGGATTTTTGCAATGTTGTTGATGTTAGGATTAATGGGTGGTTTTTGTTGTTATGTGGAAGGACTTGGTGTGAACTGGGGTACACAAGCAACACACAAGTTACCACCAGAAACTGTTGTGAAGATGTTGAAGGATAATGGGATTCAAAAAGTTAAGCTTTTTGATGCTGATGATACTACAATGACTGCTTTGGCTGGTAGTGGAATTGAAGTTATGGTTGCTATTCCTAATAATCAACTTGCTGAAATGAATGATTTTAAACGTGCTCAATATTGGGTTAGGAAGAATGTTACTCGTTATAACTTTGATGGCGGTGTTAAGATCAAATATGTAGCTGTTGGGAATGAGCCATTTTTGAAATCTTACAACAATTCATTCTTGAACATCACCTTTCCTGCACTGCAGAACATTCAAAATGCCATCAATGAAGCTGGTCTTGGTGACACCGTAAAGGCAACAGTACCCTTAAACGCAGATGTCTATATGTCTCCGCCGGACAATCAAGTTCCATCTGCGGGAATATTTCGGCCCGATATCAATGGTCTCATGACTCAGATGGTACAATTTCTCAACAAGAACGGAGCACCTTTTACTGTCAACATTTACCCCTTCTTAAGTCTCTACGGGAACGACGATTTCCCATTCAACTTCGCCTTCTTCGACGGGGTAGACAAACCAATAACTGACAATGGAATCCAATATACCAACGTCTTTGACGCAAATTTCGATACACTGGTTTCTGCTCTCAAATCGATTGGTTTCGGCGACACGCCAATTTTGGTAGGAGAAGTAGGATGGCCAACAGAAGGTGACAAGAATGCCAATTCCGGCAATGCAATAAGATTCTACAACGGCCTCCTTTCTAGACTCGCTGCGAACAAAGGAACTCCTCTCCGCCCCGGATTCATCGAAGTTTATCTGTTTGGACTCATCGATGAGGACGCGAAGAGCATCGCTCCAGGTAACTTTGAGAGACACTGGGGAATATTTCGATATGATGGACAACCGAAGTTTCAGATGGATCTTTCGGGTCAACTTCAAAACAAACTTCTAATAGGTGCACAGGGTGTGAAGTATCTTGATCCAATGTGGTGCATGTTTAACCCTGATGCTAAAGATCTCAGCAAACTTGCTGATAACATTAACTTTGCTTGCACCTTTGGAGATTGTACTGCACTTGGGTATGGATCTTCTTGCAACAACCTTGATGCTAATGGAAATGCTTCTTATGCATTCAACATGTACTACCAGACGCAGAATCAGGATCGTCAAGCGTGCAATTTTGAAGGTTTAGCTAAGCCTACTACAGACAACATTTCAACACCTACTTGCAATTTTATCATCCAAATAGTTCCTTCTTCAGCATCTTCTTTGATGCCCTCATTTGCTGCTGTTTTATTGTTTATTGCTTTTTCTGTGATTCTCTTGGCTTAG 1446 0.4122 MEKKWIFAMLLMLGLMGGFCCYVEGLGVNWGTQATHKLPPETVVKMLKDNGIQKVKLFDADDTTMTALAGSGIEVMVAIPNNQLAEMNDFKRAQYWVRKNVTRYNFDGGVKIKYVAVGNEPFLKSYNNSFLNITFPALQNIQNAINEAGLGDTVKATVPLNADVYMSPPDNQVPSAGIFRPDINGLMTQMVQFLNKNGAPFTVNIYPFLSLYGNDDFPFNFAFFDGVDKPITDNGIQYTNVFDANFDTLVSALKSIGFGDTPILVGEVGWPTEGDKNANSGNAIRFYNGLLSRLAANKGTPLRPGFIEVYLFGLIDEDAKSIAPGNFERHWGIFRYDGQPKFQMDLSGQLQNKLLIGAQGVKYLDPMWCMFNPDAKDLSKLADNINFACTFGDCTALGYGSSCNNLDANGNASYAFNMYYQTQNQDRQACNFEGLAKPTTDNISTPTCNFIIQIVPSSASSLMPSFAAVLLFIAFSVILLA 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02520 481 Gene3D Glycosidases 25 353 - -
Mepo3g02520 481 FunFam Glucan endo-1,3-beta-glucosidase 5 25 352 - -
Mepo3g02520 481 Pfam X8 domain 368 436 IPR012946 -
Mepo3g02520 481 SUPERFAMILY (Trans)glycosidases 26 345 IPR017853 -
Mepo3g02520 481 Gene3D - 363 461 - -
Mepo3g02520 481 SMART X8_cls 367 450 IPR012946 -
Mepo3g02520 481 FunFam Glucan endo-1,3-beta-glucosidase 8 363 459 - -
Mepo3g02520 481 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 16 438 IPR044965 GO:0004553|GO:0005975
Mepo3g02520 481 Pfam Glycosyl hydrolases family 17 26 345 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02520 Mepo-Chr3 35292200 35295604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02520 6 455 Miscellaneous Gene Families AT2G19440 74.444 0.0 688
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02520 - - gmx:100815300 820.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02520 3 35292200 35295604 Mepo3g02520 3 35292200 35295604 ECH