Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02484 ATGGGGTTTTCTTTGTGCATTTGGTCTCTAATTTTGTCGTCTCTAACGTCCGCGGCTTTCAGCGCCACCCCGCGAAGGCCGGTAGATGTACCTTTCGGTCAAAACTATGTGCCCACTTGGGCTTTTGATCATATCAAATACTTTAATGAAGGTTCAGAGATTGAACTTCTTCTTGATAAATACACTGGTACTGGCTTCCAATCTAAAGGATCATACTTGTTTGGGCACTTCAGCATGAACATAAAGATGGTTCCTGGTGATTCAGCTGGCACAGTCACTGCTTTCTATTTATCTTCCCAAAATGCGGAACATGATGAAATAGATTTTGAGTTTTTGGGTAATCGAACAGGACAACCTTATATTTTACAAACAAATGTGTTCACCGGAGGCCAAGGTAATAGAGAACAAAGAATCTTTCTCTGGTTTGATCCTACAAAAGCCTACCATAGATACTCCGTTCTATGGAACATGTATCAAATTGTGTTCTTTGTGGACAATATCCCAATCAGGGTGTTCAAGAACAGCAAGAAATTAGGAGTGAAATTTCCATTTGATCAACCAATGAAGGTTTACAACAGTTTATGGAATGCAGATGATTGGGCAACAAGGGGTGGATTAGAAAAAACAGATTGGTCAAAAGCACCATTCATAGCAGGTTACAAAAGTTTCCACATTGATGGTTGTGAAACCTCAGTTAATGCAAAGTACTGTGCAAAACAAGGTAGAAAATGGTGGAATCAACCTGAATTTCGTGACCTTGATGCTGCTCAATGGAAAAGGATAAAGTGGGTTCGTAAGAAATTTACCATTTATAATTACTGTACTGATAGAAACCGTTTCCCTCAGATACCCCCTGAATGTAGAAGAGACCGTGACATTTAA 882 0.3957 MGFSLCIWSLILSSLTSAAFSATPRRPVDVPFGQNYVPTWAFDHIKYFNEGSEIELLLDKYTGTGFQSKGSYLFGHFSMNIKMVPGDSAGTVTAFYLSSQNAEHDEIDFEFLGNRTGQPYILQTNVFTGGQGNREQRIFLWFDPTKAYHRYSVLWNMYQIVFFVDNIPIRVFKNSKKLGVKFPFDQPMKVYNSLWNADDWATRGGLEKTDWSKAPFIAGYKSFHIDGCETSVNAKYCAKQGRKWWNQPEFRDLDAAQWKRIKWVRKKFTIYNYCTDRNRFPQIPPECRRDRDI 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02484 293 Gene3D - 17 293 - -
Mepo3g02484 293 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 25 287 IPR044791 GO:0004553
Mepo3g02484 293 SUPERFAMILY Concanavalin A-like lectins/glucanases 28 291 IPR013320 -
Mepo3g02484 293 Pfam Glycosyl hydrolases family 16 33 213 IPR000757 GO:0004553|GO:0005975
Mepo3g02484 293 PIRSF EndGlu_transf 1 292 IPR016455 GO:0010411|GO:0016762|GO:0042546
Mepo3g02484 293 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 241 287 IPR010713 GO:0005618|GO:0016762|GO:0044042|GO:0048046
Mepo3g02484 293 ProSitePatterns Glycosyl hydrolases family 16 active sites. 106 116 IPR008263 GO:0004553|GO:0005975
Mepo3g02484 293 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 18 220 IPR000757 GO:0004553|GO:0005975
Mepo3g02484 293 CDD GH16_XET 27 287 IPR016455 GO:0010411|GO:0016762|GO:0042546
Mepo3g02484 293 FunFam Xyloglucan endotransglucosylase/hydrolase 19 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02484 Mepo-Chr3 34837802 34840089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02484 4 293 Glycoside Hydrolase AT5G13870 77.931 5.00e-179 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02484 K08235 - gmx:100779122 537.339