Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02469 ATGACTTCTCTTCTCCCATCTCCACAACTCATTTCCACACCCCCCTTCACCAAACTCATCACCCCCTCAAAACCATGTCACCTCTTCTTCCTCCATCACCCCTTTCACCACAAAACTATCAAAAAACTACTTTTTACACCACCCTTTTACCCCCTCAATGCAGTCCACACAACAGGACTCTATGCCCCTTCTTCACCCTCCAAAACTGACCCTGAAAATGACCCTATCTCAACACTCAACGAACGCATTCGTCGCGAATATGGCAAAAGAGAGGTTTCTAGGACTGTTATGAACACTGAGGAAGCTGATAAGTATATACAAATGGTTAAGGAACAACAGCAGAGGGGGTTGCAGAAGCTTAAGGGTGATAGAGAGGGTAAAGATGGTAGCTTTAGTTATAAGGTAGACCCTTATACACTTCGTTCTGGGGACTATGTTGTGCATAAGAAAGTTGGTATTGGGAGATTCTTTGGGATTAAATTCGATGTTTCGAAGAATTCGAATGAACCTACTGAGTATGTTTTTATTGAGTATGCTGATGGAATGGCTAAGCTTCCTGTTAAACAGGCTTCTAAAATGCTCTATAGATATAGTCTTCCAAATGAAAACCAAAAGCCTAAGGCATTGAGCAAGTTGAATGATACAAGTGCATGGGAGAAAAGAAAGATTAAAGGGAAGGTTGCCATACAGAAGATGGTTGTTGACTTGATGGAGCTCTATCTGCATAGGCTTAAACAAAGAAGGCCTCCCTATCCTATGAGTCCTGTCGTGGCTGAATTCGCAGCCAAATTTCTTTATGAACCTACGCCGGATCAGAAACAGGCTTTTATTGATGTTGAGAAGGATTTGACGGAGCGAGAAACTCCAATGGACAGGTTAATTTGTGGAGATGTTGGTTTTGGTAAAACTGAGGTTGCGATGCGTGCCATCCACTGTGTTGTCGCAGCTAAAAAGCAAGCAATGGTTCTCGCACCGACAATAGTTCTAGCAAAACAACATTTTGATGTTATTTCAGAGCGATTTTCTGTATATCCTGATATTAAAGTTGGACTGCTAAGCAGGTTTCAGACCAAATCAGAGAAGGAAGTATACTTGGAAATGATTAAGAATGGTGACTTAGATATTATTGTTGGAACTCACTCGCTCTTAGGAAACCGTGTTGTTTATAACAATCTTGGCCTGCTTGTGGTTGATGAGGAACAGAGGTTTGGTGTCAAACAGAAGGAGAGGATTGCTTCATTTAAAACTTCTGTGGACGTACTTACTTTATCTGCGACGCCTATACCACGGACTCTTTATTTAGCATTGACAGGATTTCGTGATGCTAGTTTAATTTCAACTCCACCTCCAGAAAGAGTTCCTATCAAGACTCAGCTTTCATCATTCAGCAAGGACAAAGTAATATCAGCCATCAAGTATGAGCTGGACCGTAGTGGCCAAGTTTTTTATGTTCTGCCACGTATTAAAGGACTTGAAGAAGCAATGGAATTTCTTGAAGAGGCATTCCCTGATGTGGAAATAGCCGTTGCCCATGGGAAGCAATACTCAAAACAATTAGAGGATACCATGGAGAAGTTTGCTTTAGGTGAAATAAAAATCCTTATCAGTACAAATATAGTTGAAAGTGGGCTTGACATTCAAAATGCAAACACTATCATCATTCAGGATGTTCAACAATTCGGCCTTGCACAGTTGTACCAGTTGCGAGGAAGGGTTGGGCGGGCAGACAAGGAAGCTTATGCATACTTATTTTATCCTGACAAGAGTCTGCTAACTGATCAAGCATTGGAAAGGCTTGCAGCTCTTGAAGAATGTCATGAACTTGGTCAAGGCTTCCAACTAGCCGAGAGAGACATGGGTATAAGAGGTTTTGGTACTATTTTCGGCGAGCAACAAACAGGAGATGTTGGAAACGTTGGCATTGATCTTTTCTTTGAGATGCTCTTTGAGAGTTTATCCAAGGTTGAAGATCACCGTGTTGTTTCAGTTCCTTATCACTCGGTGCAGGTTGACTTAAACATCAATCCTCACCTCTCTTCTGAATACATAAATCATCTCGAGAACCCTATGGAAATAATAAAGGAAGCTGAGCGAGTTGCTGGGGAAGACATCTGGAGTTTAATGCAATTTACAGAGAACTTCCGCCGCCAATATGGCAAAGAACCTCGCCCCATGGAGCTTATCTTAAAGAAGCTTTACTTGAGGAGAATGGCAGCTGATATAGGGGTAACCAGAATTTACTCTTCAGGGAAGACGGTGTTTATGAAAACAAACATGAATAAAAAGGTTTTCAAGATGATGACAGAGTCGATGACATCGGATATATATAAAGATTCATTGGTTCTTGAGGGTGACCAAATTAAGGCTGAACTTCTATTAGAGCTACCAAAAGAACAGCTTCTTAATTGGATATTTAACTGCATGGCTGAACTTCATGCTTCACTAGCAGCCCTCATAAAGTACTAG 2466 0.4132 MTSLLPSPQLISTPPFTKLITPSKPCHLFFLHHPFHHKTIKKLLFTPPFYPLNAVHTTGLYAPSSPSKTDPENDPISTLNERIRREYGKREVSRTVMNTEEADKYIQMVKEQQQRGLQKLKGDREGKDGSFSYKVDPYTLRSGDYVVHKKVGIGRFFGIKFDVSKNSNEPTEYVFIEYADGMAKLPVKQASKMLYRYSLPNENQKPKALSKLNDTSAWEKRKIKGKVAIQKMVVDLMELYLHRLKQRRPPYPMSPVVAEFAAKFLYEPTPDQKQAFIDVEKDLTERETPMDRLICGDVGFGKTEVAMRAIHCVVAAKKQAMVLAPTIVLAKQHFDVISERFSVYPDIKVGLLSRFQTKSEKEVYLEMIKNGDLDIIVGTHSLLGNRVVYNNLGLLVVDEEQRFGVKQKERIASFKTSVDVLTLSATPIPRTLYLALTGFRDASLISTPPPERVPIKTQLSSFSKDKVISAIKYELDRSGQVFYVLPRIKGLEEAMEFLEEAFPDVEIAVAHGKQYSKQLEDTMEKFALGEIKILISTNIVESGLDIQNANTIIIQDVQQFGLAQLYQLRGRVGRADKEAYAYLFYPDKSLLTDQALERLAALEECHELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFESLSKVEDHRVVSVPYHSVQVDLNINPHLSSEYINHLENPMEIIKEAERVAGEDIWSLMQFTENFRRQYGKEPRPMELILKKLYLRRMAADIGVTRIYSSGKTVFMKTNMNKKVFKMMTESMTSDIYKDSLVLEGDQIKAELLLELPKEQLLNWIFNCMAELHASLAALIKY 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02469 821 Gene3D - 140 654 IPR027417 -
Mepo3g02469 821 SUPERFAMILY CarD-like 134 203 IPR036101 -
Mepo3g02469 821 Pfam DEAD/DEAH box helicase 290 428 IPR011545 GO:0003676|GO:0005524
Mepo3g02469 821 Gene3D - 205 447 IPR027417 -
Mepo3g02469 821 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 463 620 IPR001650 -
Mepo3g02469 821 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 317 591 IPR027417 -
Mepo3g02469 821 PANTHER FANCONI ANEMIA GROUP M FANCM FAMILY MEMBER 680 782 - -
Mepo3g02469 821 Pfam CarD-like/TRCF domain 140 240 IPR003711 -
Mepo3g02469 821 SMART helicmild6 492 576 IPR001650 -
Mepo3g02469 821 Pfam Helicase conserved C-terminal domain 470 575 IPR001650 -
Mepo3g02469 821 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 283 445 IPR014001 -
Mepo3g02469 821 SMART ultradead3 264 456 IPR014001 -
Mepo3g02469 821 CDD DEXHc_TRCF 254 447 - -
Mepo3g02469 821 Gene3D - 667 815 IPR037235 -
Mepo3g02469 821 SUPERFAMILY TRCF domain-like 664 811 IPR037235 -
Mepo3g02469 821 Gene3D - 143 204 - -
Mepo3g02469 821 SMART CarD_TRCF_2 139 241 IPR003711 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02469 Mepo-Chr3 34703890 34714136 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02469 - - tpra:123888714 1402.11