Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02424 ATGAATTATTTTCCAGACGAGGTGATAGAACATGTTTTTGACTATGTGGTGTCACATAGTGACAGAAATTCTTTGTCTTTGGTATGTAAGAGTTGGTATAGAATAGAGAGATTTACAAGACAAAGAGTTTTCATAGGAAACTGTTACTCTATTAGTCCTGAGAGGTTGGTGGAGAGGTTTCCTGATCTGAAATCCTTAACTTTGAAGGGAAAGCCTCATTTTGCTGATTTTAGTTTGGTTCCTCATGGTTGGGGTGGTTTTGTTTATCCATGGATTGAAGCACTTGCTAAGAATAAGGTTGGTTTGGAGGAACTTAGGTTGAAGAGGATGGTGGTGTCAGATGAGAGCCTTGAGCTACTTTCTCGTTCTTTTGTGAATTTTAAGTCTTTAGTTCTTGTTAGCTGTGAAGGGTTCACCACTGATGGCCTTGCTGCTGTTGCTGCTAATTGCAGGTCTCTTAGAGAGCTAGACCTGCAAGAGAATGAAGTTGAAGATCACAAAGGACAGTGGCTAAGTTGCTTTCCAGAGAGCTGCACATCACTTGTCTCTCTTAATTTTGCTTGCCTTAAAGGAGATATTAATTTGGGAGCACTTGAGAGACTTGTGGCAAGATCTCCCAACCTTAAGAGTCTAAGGTTAAACAGATCTGTGCCTGTCGATGCACTGCAAAGGATACTAATGCGTGCGCCTCAACTAATGGATCTGGGTATTGGATCATTTTTCCATGATCTCAATTCAGATGCCTATGCTAAGTTTAAGGCCACCATTCTTAAGTGCAAGTCAATAACCAGTTTGTCAGGGTTTTTAGAAGTGGCTCCTTTTAGCCTTGCAGCTATTTATCCAATTTGCCAGAACTTAACATCCTTGAACTTGAGCTATGCAGCAGGCATTCTGGGCATTGAGCTGATAAAACTTATTCGCCACTGTGGGAAACTACAGCGCTTATGGATAATGGATCGCATTGGAGACTTGGGCCTAGGTGTTGTAGCTAGCACATGTAAAGAATTGCAAGAATTAAGGGTTTTCCCATCAGCTCCATTTGGAAACCAAGCAGCTGTTACCGAAAAAGGACTTGTAGCGATATCAATGGGATGTCCTAAGCTTCACTCATTACTCTACTTCTGTCACCAGATGACCAATGCTGCCCTCATAACAGTGGCCAAAAACTGCCCAAATTTTATCCGATTTAGGTTATGTATCCTCGATGCAACAAAACCTGACCCTGACACAATGCAGCCACTTGATGAAGGTTTTGGGGCGATTGTGCAGTCATGCAAGCGACTGAGGCGGCTCTCACTCTCGGGTCAGTTGACCGACCAGGTTTTCCTTTACATCGGAATGTACGCTGAGCAGCTTGAAATGTTGTCTATTGCATTTGCTGGTGAGAGTGACAAGGGAATGCTCTATGTATTGAACGGATGCAAAAAGATTCGCAAGCTTGAGATTAGAGACTGTCCTTTCGGAGATACGGCACTTCTAACAGACATAGGGAAGTATGAAACAATGCGATCCCTTTGGATGTCGTCGTGCGAGGTGACTGTAGAAGCATGCAAGACATTAGCTAAGAAGATGCCGAGGTTGAATGTGGAGATCTTCAGTGAAAGTGAACAGGCAGATTGTTATGTGGAAGATGGGCAGAGAGTGGAGAAGATGTATTTGTATCGTACAGTGGCCGGGAAAAGGGAAGATGCGCCAGACTATGTATGGACTCTAGCTCTCTAA 1722 0.4321 MNYFPDEVIEHVFDYVVSHSDRNSLSLVCKSWYRIERFTRQRVFIGNCYSISPERLVERFPDLKSLTLKGKPHFADFSLVPHGWGGFVYPWIEALAKNKVGLEELRLKRMVVSDESLELLSRSFVNFKSLVLVSCEGFTTDGLAAVAANCRSLRELDLQENEVEDHKGQWLSCFPESCTSLVSLNFACLKGDINLGALERLVARSPNLKSLRLNRSVPVDALQRILMRAPQLMDLGIGSFFHDLNSDAYAKFKATILKCKSITSLSGFLEVAPFSLAAIYPICQNLTSLNLSYAAGILGIELIKLIRHCGKLQRLWIMDRIGDLGLGVVASTCKELQELRVFPSAPFGNQAAVTEKGLVAISMGCPKLHSLLYFCHQMTNAALITVAKNCPNFIRFRLCILDATKPDPDTMQPLDEGFGAIVQSCKRLRRLSLSGQLTDQVFLYIGMYAEQLEMLSIAFAGESDKGMLYVLNGCKKIRKLEIRDCPFGDTALLTDIGKYETMRSLWMSSCEVTVEACKTLAKKMPRLNVEIFSESEQADCYVEDGQRVEKMYLYRTVAGKREDAPDYVWTLAL 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02424 573 FunFam Transport inhibitor response 1 41 571 - -
Mepo3g02424 573 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 82 530 - -
Mepo3g02424 573 CDD F-box_AtTIR1-like 1 40 - -
Mepo3g02424 573 Pfam F-box 2 41 IPR041567 -
Mepo3g02424 573 FunFam Transport inhibitor response 1 1 40 - -
Mepo3g02424 573 SUPERFAMILY RNI-like 15 530 - -
Mepo3g02424 573 Pfam Leucine Rich repeat 149 165 IPR001611 GO:0005515
Mepo3g02424 573 Gene3D Ribonuclease Inhibitor 41 571 IPR032675 -
Mepo3g02424 573 SMART fbox_2 4 45 IPR001810 GO:0005515
Mepo3g02424 573 Pfam Transport inhibitor response 1 protein domain 61 107 IPR041101 -
Mepo3g02424 573 SMART LRR_CC_2 99 123 IPR006553 -
Mepo3g02424 573 SMART LRR_CC_2 365 389 IPR006553 -
Mepo3g02424 573 SMART LRR_CC_2 474 499 IPR006553 -
Mepo3g02424 573 SMART LRR_CC_2 425 448 IPR006553 -
Mepo3g02424 573 SMART LRR_CC_2 124 149 IPR006553 -
Mepo3g02424 573 Gene3D - 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02424 Mepo-Chr3 34209455 34213148 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02424 - - gmx:100812516 1027.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02424 3 34209455 34213148 Mepo3g02424 3 34209455 34213148 ECH