Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02345 ATGGCCACTACGAATCCATTTGATTTGCTTGGTGATGACGCTGAGGACCCTTCTCAGCTCATCGTTGCTGAACAGCTCAAAGCTGCTGCTGCTCCACCTGCTGCTAAGAAAGGTGCTGTCAAGGAACAGGGCAAACCTAACAAGCCTGCTTTGTTGCCCTCTAAGCCAACCCCTCCTGCTCAGGCTGTGAGGGAGTCCAGAAATGAAGGAGGCCGCGGTGGTCGTGGATATGGTGGACGAGGAGGTGACCGTGGGTTTGGTGGACGTGGAGGTGACCGCGGATTTGGTGGTGGTCGTGGAGGTCGTGGTTTCGGTCGTGACCACTCAAATGATGACAATTCGTTCCCTGCCTCTGGAGCCCCTGAAAACCAGGGTCCTGTTGAAGAAGGAGATAGGTCCTCAGAAAGACGTAGCTATGGTGGACCACGAGGTCCCTACCGCGGAGGTCGTCGTGGAGGTTTCAACAATGGTGATGCTGGTGAAGAGGGACGACCCCGAAGAACATTTGAACGCCACAGTGGCACTGGGCGAGGAAACGATTTCAAGCGTGAAGGTGCTGGAAGGGGTAACTGGGGAACAGAAACTGATGAAATTGCCCAGGTGACTGAAGAAGTCATGAATGAAGGTGAAAAGAATTTGGGGGATGAGAAGCCTGCAGCTGAAACTGATGTTGGCGAAGGGAACAAGGATAGCCCTGCCAATGAAGCTGAAGAAAAGGAGCCTGAAGACAAGGAAATGACTCTGGAGGAATATGAGAAAGTGCTGGAAGAGAAAAGAAAGGCTTTGCAAGCTCTAAAGACTGAACAGAGAAAGGTTGACACTAAAGCATTTGAAACCATGCAGGCCTTATCGTGCAAGAAAGACAATACCGAAATCTTTGCTAAATTGGGAGCTGATAAGGATAAGCGCAAAGAGGCTTATGACAAGGAAGAGAAAGCCAGGAAGTCTGTCAGTATCAATGAGTTTCTGAAGCCAGCTGAAGGAGAATCCCAGTATAACTCAGGTGGGCGTGGCAGGGGACGTGGTGGCCGTGGTGCACGAGGAGGAGGTTTCCGTGGAAATTCGTACAGCAATGTACCTGCTCCATCCATTGAAGATCCTGGGCATTTCCCTACCTTGGGTGCCAAGTGA 1131 0.5128 MATTNPFDLLGDDAEDPSQLIVAEQLKAAAAPPAAKKGAVKEQGKPNKPALLPSKPTPPAQAVRESRNEGGRGGRGYGGRGGDRGFGGRGGDRGFGGGRGGRGFGRDHSNDDNSFPASGAPENQGPVEEGDRSSERRSYGGPRGPYRGGRRGGFNNGDAGEEGRPRRTFERHSGTGRGNDFKREGAGRGNWGTETDEIAQVTEEVMNEGEKNLGDEKPAAETDVGEGNKDSPANEAEEKEPEDKEMTLEEYEKVLEEKRKALQALKTEQRKVDTKAFETMQALSCKKDNTEIFAKLGADKDKRKEAYDKEEKARKSVSINEFLKPAEGESQYNSGGRGRGRGGRGARGGGFRGNSYSNVPAPSIEDPGHFPTLGAK 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02345 376 MobiDBLite consensus disorder prediction 160 190 - -
Mepo3g02345 376 Pfam Stm1 1 76 IPR019084 -
Mepo3g02345 376 SMART HABP4_PAI_RBP1_2 165 273 IPR006861 -
Mepo3g02345 376 MobiDBLite consensus disorder prediction 208 247 - -
Mepo3g02345 376 Pfam Hyaluronan / mRNA binding family 165 272 IPR006861 -
Mepo3g02345 376 Gene3D - 163 276 - -
Mepo3g02345 376 MobiDBLite consensus disorder prediction 298 376 - -
Mepo3g02345 376 MobiDBLite consensus disorder prediction 298 318 - -
Mepo3g02345 376 Coils Coil 248 275 - -
Mepo3g02345 376 PANTHER HYALURONIC ACID-BINDING PROTEIN 4 1 374 IPR039764 GO:0003723
Mepo3g02345 376 MobiDBLite consensus disorder prediction 27 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02345 Mepo-Chr3 33216172 33221065 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02345 K13199 - gmx:100814825 449.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02345 3 33216172 33221065 Mepo3g02345 3 33216172 33221065 ECH
Mepo1g04694 1 54877970 54882044 Mepo3g02345 3 33216172 33221065 PCT