LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo3g02277	ATGGAGGTTGTTTCACACCCTCTGTCCTGCTACTACACCACTGTAACCGCCAAAACCTTTAGGTCTTTTCCACAATTTCCCTCTTCGCCACATTTTCCTTTCTTATCTTTCCGCACCACCACTCTCTCTCATCGTCCTTCTCCTTTTCCTCTATCACCTGTAGTTCTGTTTGCGACGCCAGAGAATCAATTGAGCAGCCTTGGGGAAGGGGAGGAGGGTACTCACACAAGTGATTCCGCACTTCAAGATTTTTATTCTCTGAGGAAGGATGTTGAAATTGCATCACAGCGTGTCAAAGAGATTAGAGAATCATCTGGTCTACAATTATTGGAGCAAGAACTTGCCAAGTTGGAAGAGGAAGCATCTTGTAGCTCCTTTTGGGACGACCGAGCCAAAGCTCAACAGACTCTTTCGACATTGGCTGATGTCAAAGATAAGATAAAATTGCTCAATGAGTACAAAACTCAGGTTGAGGATGCAGAAACAATAGTTATGCTGACGGAGGAAATGGAATCCGTTGATAAAGGGCTTTATGAAGAAGCTTCTAGTCTAATTAAAGAACTGAATAAGTCAATTGATCGGTTTGAGCTGACTCAACTTCTTTCTGGTCCTTACGACAAAGAAGGTGCTGTTATCTCTATTACAGCAGGTGCGGGAGGTACTGATGCACAGGACTGGGCGGACATGCTTCTTAGGATGTATGTGAGATGGGGTGAGAAACAGAGATACAAAACCAGAGTGGTTGAGAAATCTCTTGGAGAAGAAGCTGGAATTAAATCTGCCACCATCGAAGTTGAAGGCCGTTATGCGTATGGGTATTTGTCTGGGGAGAAAGGAACACATCGCATTGTTCGACAATCCCCTTTTAATTCCAAAGGTCTTCGTCAGACAAGCTTTTCTGGTGTTGAAGTCATGCCTCTTCTTCCAGAAGAATCTCTGAATGTTGAAATTCCTGAAGAGGACCTGGAGATTAGTTTTTCAAGAGCAGGTGGAAAAGGAGGCCAGAATGTGAACAAGGTTGAAACTGCCGTACGAATTACACATATCCCAACTGGTGTCACTCTTCGCTGCACAGAGGAGAGATCCCAGCTAGCAAATAAGATAAAAGCTTTAAGTCGTTTGAAAGCGAAGCTGTTGGTGATAGCTGAAGAGCAACGTGCAACTGAATTTAAACAGATTCGAGGGGACGTAGTGAAGGCTGAATGGGGACAGCAAATAAGAAATTATGTCTTCCATCCATACAAACTAGTAAAGGATGTAAGAACAGGGCATGAAACACCAGATATCACCTCTGTTATGGATGGAGAATTGGATCCCTTCATCAAATCTTACCTCAAACACAAGTATAGTATGAGTATGACACTGTCTACAAGTGGGGTCAACTAA	1386	0.4336	MEVVSHPLSCYYTTVTAKTFRSFPQFPSSPHFPFLSFRTTTLSHRPSPFPLSPVVLFATPENQLSSLGEGEEGTHTSDSALQDFYSLRKDVEIASQRVKEIRESSGLQLLEQELAKLEEEASCSSFWDDRAKAQQTLSTLADVKDKIKLLNEYKTQVEDAETIVMLTEEMESVDKGLYEEASSLIKELNKSIDRFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSATIEVEGRYAYGYLSGEKGTHRIVRQSPFNSKGLRQTSFSGVEVMPLLPEESLNVEIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTLRCTEERSQLANKIKALSRLKAKLLVIAEEQRATEFKQIRGDVVKAEWGQQIRNYVFHPYKLVKDVRTGHETPDITSVMDGELDPFIKSYLKHKYSMSMTLSTSGVN	461

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo3g02277	461	ProSitePatterns	Prokaryotic-type class I peptide chain release factors signature.	328	344	IPR000352	GO:0003747\|GO:0006415
	Mepo3g02277	461	SUPERFAMILY	Release factor	110	449	IPR045853	-
	Mepo3g02277	461	PANTHER	PEPTIDE CHAIN RELEASE FACTOR 2	81	449	-	-
	Mepo3g02277	461	Coils	Coil	178	198	-	-
	Mepo3g02277	461	Pfam	PCRF domain	110	302	IPR005139	GO:0006415
	Mepo3g02277	461	Coils	Coil	100	120	-	-
	Mepo3g02277	461	Pfam	RF-1 domain	313	421	IPR000352	GO:0003747\|GO:0006415
	Mepo3g02277	461	Gene3D	-	212	442	-	-
	Mepo3g02277	461	NCBIfam	peptide chain release factor 2	94	446	IPR004374	GO:0005737\|GO:0006415\|GO:0016149
	Mepo3g02277	461	SMART	PCRF_a_2	165	277	IPR005139	GO:0006415
	Mepo3g02277	461	Gene3D	Release factor	90	205	-	-
	Mepo3g02277	461	Hamap	Peptide chain release factor 2 [prfB].	83	449	IPR004374	GO:0005737\|GO:0006415\|GO:0016149
	Mepo3g02277	461	Gene3D	-	308	404	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo3g02277	Mepo-Chr3	32467796	32472734	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo3g02277	K02836		-	gmx:100775574	721.85

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mepo3g02277	3	32467796	32472734	Mepo3g02277	3	32467796	32472734	ECH