Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02274 ATGTTGGTTCTGTTCCTCTGTATCTTCCTCTTGTTACTCTTCTTATTCAAATTCGCCACTGCCTATGGTGATTTCACTTTGATGTCAAAGAAGAAACCAAAACATCAACTGATTGAAGATAAGGTTTTTTGGATTACTGGTGCCAGTCGTGGAATTGGGGAAATTCTAGCTCAACAACTTGCAAGTTTAGGGGCCAAGTTAATACTATCTGCAAGGGATGAAGCTGACCTAAACCGAGTAAAGTCACAGCTAAAAGGTAAGCATGCTGACGAGGCCAAGATTTTACCATTGGATTTAACATCTGGTGAAGACTCTCTTAGGAAGGTTGTCGATGAAGCAGAATCCCTTTTCCCAGATTCTGGGGTTGATTATATGATTCATAATGCTGCTTATGAGCGTCCTAAATCATCCGTCTTAGATGTAACCGAGCAGAGTCTCAAGGCAACATTTGATGTCAATGTTTTTGGGACAATAACTCTTACAAGGCTCTTGACACCTTTCATGTTGAGGAGGGGCAAAGGTCATTTTGTGGTGATGAGTAGTGCAGCAGGAAAGACACCTGCCCCAGGTCAGGCTGTATACTCAGCTTCAAAATATGCACTAAATGGGTACTTCCATTCCTTGCGTTCAGAGCTCTGTCAGAAAGGAATCCAGGTAACTGTTGTCTGTCCCGGTCCCATAGAAACAGCAAATAACTCTGGATCGCAGGTTCCATCTGAGAAGCGTGTGTCGGCGGAGAAGTGTGTTGAGCTGACGATTATTGCTGCAACTCATGGCTTAAAGGAAGCTTGGATATCATATCAGCCTGTGCTTGCTGTCATGTATCTTGTTCAATACATGCCAACTATTGGTTATTGGCTCATGGACAAGGTTGGTAAAAATCGAGTGGAGGCTGCTAAAGAGAAGGGAAACGCATATTCTTTGAGCCTACTATTTGGGAAAAAGAAGGCAGTGTGA 957 0.4316 MLVLFLCIFLLLLFLFKFATAYGDFTLMSKKKPKHQLIEDKVFWITGASRGIGEILAQQLASLGAKLILSARDEADLNRVKSQLKGKHADEAKILPLDLTSGEDSLRKVVDEAESLFPDSGVDYMIHNAAYERPKSSVLDVTEQSLKATFDVNVFGTITLTRLLTPFMLRRGKGHFVVMSSAAGKTPAPGQAVYSASKYALNGYFHSLRSELCQKGIQVTVVCPGPIETANNSGSQVPSEKRVSAEKCVELTIIAATHGLKEAWISYQPVLAVMYLVQYMPTIGYWLMDKVGKNRVEAAKEKGNAYSLSLLFGKKKAV 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02274 318 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 181 209 IPR020904 GO:0016491
Mepo3g02274 318 Pfam short chain dehydrogenase 41 233 IPR002347 -
Mepo3g02274 318 SMART This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 41 229 - -
Mepo3g02274 318 Gene3D - 23 297 - -
Mepo3g02274 318 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 38 289 IPR036291 -
Mepo3g02274 318 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 2 316 - -
Mepo3g02274 318 PRINTS Glucose/ribitol dehydrogenase family signature 215 232 IPR002347 -
Mepo3g02274 318 PRINTS Glucose/ribitol dehydrogenase family signature 168 184 IPR002347 -
Mepo3g02274 318 PRINTS Glucose/ribitol dehydrogenase family signature 194 213 IPR002347 -
Mepo3g02274 318 PRINTS Glucose/ribitol dehydrogenase family signature 120 131 IPR002347 -
Mepo3g02274 318 PRINTS Glucose/ribitol dehydrogenase family signature 42 59 IPR002347 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02274 26 225 Acyl Lipid Metabolism Gene Families AT3G55310 30.244 5.68e-17 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02274 K11165 - gmx:100795991 521.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02274 3 32441070 32446405 Mepo3g02274 3 32441070 32446405 ECH