Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02272 ATGGCGGAAAATGCTTCAACTGAACTGAAGATGTTTGTGTTATTCTGTTTGTTGCTACTACAAGTTTCACTTTCTGAAGTCATCTTCGAAGAGCGTTTTGAAGATGGATGGCGAAGTCGTTGGGTAAGATCAGACTGGAAAAGTAGCGAAGGCAAAGCCGGTTCGTTCAAGCACACGGCTGGGAAATGGGCTGGAGATCCAGATGATAAAGGTATCCAAACATCTAATGATGCCAAACACTTTGCGATCTCTGCAAAGATACCAGAATTCAGCAACAAGAACAGAACACTAGTCTTCCAGTATTCTATAAAATTTGAACAAGAGATTGAGTGTGGTGGAGGTTACATGAAGCTCCTCTCTGGATTTGTTAATCAAAAGAAATTTGGTGGGGATACGCCATATAGTGTAATGTTTGGACCAGATTTATGTGGAACAGACACAAAGAAGCTCCATGTCATAGTCTCTTACCAAGGTCAAAATTACCCGGTAAAGAAGGACCTGCAGTGTGAAACTGACAAGTTAACTCATTTCTACACATTCATTCTCAGGCCAGATGCTACATACAGTGTTCTGGTTGATAATAGAGAGCGAGATTCCGGAAGCTTGTATACAGATTGGGATATTCTCCCTCCACGAAAAATCAAAGATCTCAAGGCAAAAAAGCCTGCAGACTGGGAAGACAGAGAATACATTGAAGACCCTAATGCTGTCAAACCTGAGGGATATGATTCAATCCCAGCAGAAATTCCTGATCCAAAGGCTAAAGAGCCTGATAGTTGGGATGAAGACGAAGATGGAATATGGAAGCGGCCGAAGATACCAAATCCGGCATACAAAGGACCATGGAAACGAAAGAAAATCAAGAATCCTAACTACAAAGGGAAATGGAAAACTCCATGGATAGATAATCCAGAGTTTGAAGATGACCCCGATCTTTATGTGCTTAAGCCTATCAAATATGTCGGCATAGAAGTTTGGCAGGTTAAAGGTGGTTCAGTATTTGACAACATTTTGATTTGTGATGATCCTGAATATGCAAAACAAGTTGTTGATGAAGTGTTTGCGAACAGGGAGATTGAAAAAGAGGCTTTTGAGGAAGCAGAGAAAGTAAGAAAAGCCCAAGAAGAGGAGGAGGCTCAAAGAGCAAGAGAAGACGGTGAAAGGCGGAGAAAAGAGAGAGGCTATGATCGACACCGTGACAGACATAGAGACAGATATAGAAAGGTTTGTATCATACATGCATACGTTCAATATTTTAATCTTTTGCTTTGTAATGAACATTCGCTCCCTTTTTGA 1296 0.4105 MAENASTELKMFVLFCLLLLQVSLSEVIFEERFEDGWRSRWVRSDWKSSEGKAGSFKHTAGKWAGDPDDKGIQTSNDAKHFAISAKIPEFSNKNRTLVFQYSIKFEQEIECGGGYMKLLSGFVNQKKFGGDTPYSVMFGPDLCGTDTKKLHVIVSYQGQNYPVKKDLQCETDKLTHFYTFILRPDATYSVLVDNRERDSGSLYTDWDILPPRKIKDLKAKKPADWEDREYIEDPNAVKPEGYDSIPAEIPDPKAKEPDSWDEDEDGIWKRPKIPNPAYKGPWKRKKIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPIKYVGIEVWQVKGGSVFDNILICDDPEYAKQVVDEVFANREIEKEAFEEAEKVRKAQEEEEAQRAREDGERRRKERGYDRHRDRHRDRYRKVCIIHAYVQYFNLLLCNEHSLPF 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02272 431 PIRSF Calreticulin 5 409 IPR009169 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Mepo3g02272 431 FunFam Calreticulin 211 312 - -
Mepo3g02272 431 SUPERFAMILY P-domain of calnexin/calreticulin 207 322 IPR009033 GO:0005509|GO:0005515
Mepo3g02272 431 MobiDBLite consensus disorder prediction 230 271 - -
Mepo3g02272 431 Gene3D - 26 384 - -
Mepo3g02272 431 Gene3D Calreticulin/calnexin, P domain 200 320 IPR009033 GO:0005509|GO:0005515
Mepo3g02272 431 PANTHER CALRETICULIN AND CALNEXIN 10 385 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Mepo3g02272 431 MobiDBLite consensus disorder prediction 249 270 - -
Mepo3g02272 431 Coils Coil 356 392 - -
Mepo3g02272 431 Pfam Calreticulin family 30 265 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Mepo3g02272 431 Pfam Calreticulin family 266 339 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Mepo3g02272 431 MobiDBLite consensus disorder prediction 370 397 - -
Mepo3g02272 431 PRINTS Calreticulin signature 249 271 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Mepo3g02272 431 PRINTS Calreticulin signature 132 148 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Mepo3g02272 431 PRINTS Calreticulin signature 287 306 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Mepo3g02272 431 PRINTS Calreticulin signature 320 340 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Mepo3g02272 431 PRINTS Calreticulin signature 106 124 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Mepo3g02272 431 PRINTS Calreticulin signature 221 234 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Mepo3g02272 431 SUPERFAMILY Concanavalin A-like lectins/glucanases 21 224 IPR013320 -
Mepo3g02272 431 FunFam Calreticulin 1b 26 208 - -
Mepo3g02272 431 ProSitePatterns Calreticulin family signature 1. 104 119 IPR018124 GO:0005509
Mepo3g02272 431 ProSitePatterns Calreticulin family signature 2. 136 144 IPR018124 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02272 Mepo-Chr3 32425301 32430685 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02272 10 347 Miscellaneous Gene Families AT5G61790 34.913 3.03e-61 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02272 K08057 - gmx:100801827 685.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02272 3 32425301 32430685 Mepo3g02272 3 32425301 32430685 ECH