Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02263 ATGGATCGTGTTAGAGGTTTGATTCTTATTGTGATGTTGTTGTTTGTTGATGCTTCCAATGCTAATTTGGTTTTCCCTGTTCAACGTAAATTCAAAGGTCCTCATCGGAGTTTAGATGCTATCAAAGCTCATGATGATAGGAGACGTGGTAGATTTCTTTCTGCTATTGATATTCCTCTTGGTGGCAATGGTCTTCCTTCTTCAACTGGGTTGTATTATACCAAAGTAGGGCTTGGCTCTCCTGCTAAGGAGTTCCATGTACAAGTTGACACAGGAAGTGACATTCTTTGGGTGAACTGTGCAGGCTGCACAGCATGTCCCAAGAAGAGTGGTCTTGGTATGGATTTAACCCTCTATGACCCTAACGGCTCGAAAACTTCAAATGCGGTTCCTTGTGATGACGGTTTCTGCACTGACACATATGCTGGTCCAATTTCTGGATGCAAGCAAGACATGTCCTGTCCATACAGCATAACCTATGGAGATGGAAGTACAACCTCCGGATCCTTTGTGAAGGATTCTCTTACGTTCGACGAAGTTAGTGGTAATCTCCATACCAAACCAGACAATAGCAGTGTGATTTTTGGGTGCGGTGCTAAACAATCTGGTACATTGAGTTCGTCTTCTGACGAAGCCCTTGATGGAATAATTGGTTTTGGACAAGCAAATTCTTCTGTGCTTTCACAACTTGCTGCATCTGGAAAGGTGAAAAGAATATTTTCACACTGCCTTGATAGTCACCATGGAGGAGGAATATTTTCTATAGGGCAAGTCATGGAGCCAAAATTTAATACTACTCCGTTGGTACCAAGAATGACACACTACAATGTGGTTTTGAAGGACATGGAGGTTGACGGGGAACCTATTGAGCTCCCTTTAGATTTATTTGATTCTGGAGATGGAAGAGGAACAATAATAGATAGCGGTACAACCTTGGCGTATCTTCCGGTTTCGATTTACAATCAGTTAGTAACAAAGGTTTTGGGTCGGCAACCTGGATTGAAATTAATGATTGTTGAGGACCAATTTACTTGTTTTCATTATTCTGACAAGTTTGATGAAGGATTTCCAGTTGTCAAGTTTCACTTTAAGGGGCTTTCTCTGACAGTTCATCCGCATGACTACCTGTTCCTGTATAAAGAAGATATTTATTGTATCGGCTGGCAGAAAAGTAATACACAGACTAAGGATGGAAAAGACCTGATTCTTCTCGGAGATTTGGTGCTGTCAAACAAATTAGTTGTATATGATCTTGAAAATATGGTCATTGGATGGACCGATTTCAATTGTGAGTTCCCTGCTTATTTATTTACTTACTAA 1320 0.4083 MDRVRGLILIVMLLFVDASNANLVFPVQRKFKGPHRSLDAIKAHDDRRRGRFLSAIDIPLGGNGLPSSTGLYYTKVGLGSPAKEFHVQVDTGSDILWVNCAGCTACPKKSGLGMDLTLYDPNGSKTSNAVPCDDGFCTDTYAGPISGCKQDMSCPYSITYGDGSTTSGSFVKDSLTFDEVSGNLHTKPDNSSVIFGCGAKQSGTLSSSSDEALDGIIGFGQANSSVLSQLAASGKVKRIFSHCLDSHHGGGIFSIGQVMEPKFNTTPLVPRMTHYNVVLKDMEVDGEPIELPLDLFDSGDGRGTIIDSGTTLAYLPVSIYNQLVTKVLGRQPGLKLMIVEDQFTCFHYSDKFDEGFPVVKFHFKGLSLTVHPHDYLFLYKEDIYCIGWQKSNTQTKDGKDLILLGDLVLSNKLVVYDLENMVIGWTDFNCEFPAYLFTY 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02263 439 ProSiteProfiles Peptidase family A1 domain profile. 72 426 IPR033121 -
Mepo3g02263 439 FunFam Eukaryotic aspartyl protease family protein 62 256 - -
Mepo3g02263 439 Gene3D Acid Proteases 57 257 IPR021109 -
Mepo3g02263 439 SUPERFAMILY Acid proteases 66 430 IPR021109 -
Mepo3g02263 439 CDD pepsin_A_like_plant 72 430 IPR034161 -
Mepo3g02263 439 PANTHER ASPARTYL PROTEASES 9 424 IPR001461 GO:0004190|GO:0006508
Mepo3g02263 439 Pfam Xylanase inhibitor C-terminal 274 426 IPR032799 -
Mepo3g02263 439 Pfam Xylanase inhibitor N-terminal 72 256 IPR032861 -
Mepo3g02263 439 Gene3D Acid Proteases 258 434 IPR021109 -
Mepo3g02263 439 PRINTS Pepsin (A1) aspartic protease family signature 402 417 IPR001461 GO:0004190|GO:0006508
Mepo3g02263 439 PRINTS Pepsin (A1) aspartic protease family signature 304 315 IPR001461 GO:0004190|GO:0006508
Mepo3g02263 439 PRINTS Pepsin (A1) aspartic protease family signature 78 98 IPR001461 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02263 Mepo-Chr3 32352996 32356517 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02263 54 431 Miscellaneous Gene Families AT1G44130 27.273 5.50e-36 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02263 - - gmx:100779846 645.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02263 3 32352996 32356517 Mepo3g02263 3 32352996 32356517 ECH