Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02175 ATGTCCTACCTTTTCTACACCCTTGGTTTCCTTACTTATAATAATACTTCACATCAATATGATAAAAACCCTCACATACTTTCTCCAATTAAACACCAAATTGAACCTATACCAAAATTATCCTTGGAACAAAAAACCAATATTTCACACATAGTGTTTGGAATAGGAGCCTCATCAAAATTATGGAACCATAGAAAAGAATATATTAAATTATGGTGGAAGCCTAATATAACAAGAGGCAATGTATGGTTAGACAAAAAAGTGAAAATTAAACCTAGTGATAAGAAACTTCTTCCAACATTGAAGATATCTAGTGACACATCAAAATTCAAGTACAAACATCCACATGGGACGAGGTCAGGGATTAGGATATCTAGGATTGTGTCGGAGACAGTAAGGTTAAGGTTGGAGAATGTGAGGTGGTTTGTGATGGGGGATGATGACACATTTTTTGTGACTGAGAATTTGGTGAAGTTGTTACAAAAATATGATCATAATGGATTTTATTATATTGGGGCAAATTCGGAAAGTCACTTTCAGAATATTAATTTTTCTTATAATATGGCTTATGGTGGTGGTGGATTTGCTATTAGTTACCCTTTGGCTGTTGCATTAGAGAGAATGCAAGATAGGTGTATTGAAAGGTACCCTAAATTGTATGGGTCAGATGATAGGATTCAAGCTTGTATGGCTGAGCTTGGTGTTCCTCTCACCATAGAGAAAGGCTTTCATCAGTTTGATGTATATGGCAATGTGTTTGGACTCCTAGCAGCTCATCAGGTTACACCACTAGTGTCCCTACATCACTTGGACCTAATTGAACCCATTTTTCCAAACATAAACCGGGTTCAGGCCCTACAGCAATTCAAAGACCCAATAAAACTCGACCCATACGGCCTCATGCAACAATCTATATGCTATGACAAAAACCGGGTTTGGACCGTATCGGTTTCTTGGGGCTATGTGGTTCAAATATTTCGTGGCATTTTCTCGGCACGAGATATTGAAATGCCCGCGAGAACTTTCTTGAATTGGTATCGCCGAGTTGATTATAATGGGTTTCCATTTAACACAAGACCTTTTAGTCGCAATGCTTGTCAAAAACCGTTTGTTTTTCATTTGTCTAATACTACCTATGATGTTGCTGCTAATGAAATTGTCACAAGATATGTTAGGGTCCAACCTAACCCTAATTGCAAGTGGAAAATGGAGGATCCTACACAGATTCATATGGTGGAAGTTTACAAGAAACCAGATCCATATTTGTGGGACAAGACCAACCCTTTTGAGGCTTCCGATAACGAGTTCAAAAGGACTACTACAACTTCGACTAGGCATAAAAATATCACTGATATTCCTGCCACGGTAGACCGGAGGAAACGTGGAGCAGTTACTCCAGTCAAGAATCAAAGAGGATGTGATAACGGTGGAATTGCCACAGAAGCAAGTTATCCATACAAGGGAGTTAAAGGAAATTGTAAGAAGGTACTCGGGGGTGTTAAGAAGCGAAAACGGAAGAAAAAGGCTGAAAATGAGCTTGTGATGGCCAAGTCCCAGCAGTGA 1563 0.3896 MSYLFYTLGFLTYNNTSHQYDKNPHILSPIKHQIEPIPKLSLEQKTNISHIVFGIGASSKLWNHRKEYIKLWWKPNITRGNVWLDKKVKIKPSDKKLLPTLKISSDTSKFKYKHPHGTRSGIRISRIVSETVRLRLENVRWFVMGDDDTFFVTENLVKLLQKYDHNGFYYIGANSESHFQNINFSYNMAYGGGGFAISYPLAVALERMQDRCIERYPKLYGSDDRIQACMAELGVPLTIEKGFHQFDVYGNVFGLLAAHQVTPLVSLHHLDLIEPIFPNINRVQALQQFKDPIKLDPYGLMQQSICYDKNRVWTVSVSWGYVVQIFRGIFSARDIEMPARTFLNWYRRVDYNGFPFNTRPFSRNACQKPFVFHLSNTTYDVAANEIVTRYVRVQPNPNCKWKMEDPTQIHMVEVYKKPDPYLWDKTNPFEASDNEFKRTTTTSTRHKNITDIPATVDRRKRGAVTPVKNQRGCDNGGIATEASYPYKGVKGNCKKVLGGVKKRKRKKKAENELVMAKSQQ 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02175 520 SUPERFAMILY Cysteine proteinases 429 498 IPR038765 -
Mepo3g02175 520 MobiDBLite consensus disorder prediction 500 520 - -
Mepo3g02175 520 FunFam Fringe-related protein-like 39 294 - -
Mepo3g02175 520 Gene3D - 38 297 - -
Mepo3g02175 520 PANTHER FRINGE-RELATED 8 440 - -
Mepo3g02175 520 Pfam Protein of unknown function, DUF604 180 426 IPR006740 -
Mepo3g02175 520 Gene3D Cysteine proteinases 400 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02175 Mepo-Chr3 31310230 31319901 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02175 45 426 Glycosyltransferase AT5G41460 66.927 0.0 559
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02175 - - gmx:100777888 659.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02175 3 31310230 31319901 Mepo1g03791 1 44144076 44148771 PCT