Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02106 ATGGCTGCAGCAAAACTAAGGTATGCAGTTGTTACTGGGTCAAACAAAGGGATAGGATTTGAGACTGTTAAAATGTTGGCCTCAAATGGTGTGAAGGTGATGCTCACAGCTAGGGATGAGAAAAAAGGGCATGAAGCCATTGAGAAATTGAAAGAGTTTGATCTCTCTGACCAAGTTATGTTTCACCAACTTGATGTCACTCACCCTGCTAGTATTACTTCACTAGTAGAGTTTTTTAAGACAAGGTTTGGGAGACTTGATATCTTGGTGAACAATGCAGGAGTTAGTGGTGTCAATCCATATGAAACGGTGGGATCAACAGTTGATTGGGAGCAATTGACACAAACTTGTGAGATGGCTCAAAAGTGCCTAAAAACAAACTACTATGGTGTTAAGGAAACAACTGAGGCATTTCTTCCCCTTCTCAAGTTATCCAATTCTCCCAAGATTGTTAACGTTTCCTCCCAAGCAGCATCATTGCAGAATATACCAAATCAATGGGCTAAAAGGGTGTTTGATGATATTGAAAATCTCACAGAAGAGAGAATAGATGAGGTACTAAAAGAGTTCATCAAAGACTTCAAAGAAGGTTCACTTGAAAACAAAGGGTGGCCAACAATCATGTCTGCCTATATTGTCTCAAAAGCAGCCATGAATTCTTACACAAGGATTCTGGCCAAGAAGTATCCAAACATGTGCATCAATTGTGTGTGTCCTGGTTTTGTTAAAACAGACATCAACAAAAACACTGGCATGTTACCTGTTGACCAAGGTGCTGCTAGTGTTGTGAGATTAGCACTGCTTCCTGATGGTTCCCCTTCTGGCCTCTTCTTTATTAGGGAAGAAATATCAAACTTTTGA 861 0.4019 MAAAKLRYAVVTGSNKGIGFETVKMLASNGVKVMLTARDEKKGHEAIEKLKEFDLSDQVMFHQLDVTHPASITSLVEFFKTRFGRLDILVNNAGVSGVNPYETVGSTVDWEQLTQTCEMAQKCLKTNYYGVKETTEAFLPLLKLSNSPKIVNVSSQAASLQNIPNQWAKRVFDDIENLTEERIDEVLKEFIKDFKEGSLENKGWPTIMSAYIVSKAAMNSYTRILAKKYPNMCINCVCPGFVKTDINKNTGMLPVDQGAASVVRLALLPDGSPSGLFFIREEISNF 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02106 286 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 156 IPR002347 -
Mepo3g02106 286 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 211 230 IPR002347 -
Mepo3g02106 286 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 IPR002347 -
Mepo3g02106 286 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 7 283 - -
Mepo3g02106 286 FunFam (+)-neomenthol dehydrogenase 2 286 - -
Mepo3g02106 286 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 272 IPR036291 -
Mepo3g02106 286 PRINTS Glucose/ribitol dehydrogenase family signature 8 25 IPR002347 -
Mepo3g02106 286 PRINTS Glucose/ribitol dehydrogenase family signature 142 158 IPR002347 -
Mepo3g02106 286 PRINTS Glucose/ribitol dehydrogenase family signature 211 230 IPR002347 -
Mepo3g02106 286 PRINTS Glucose/ribitol dehydrogenase family signature 84 95 IPR002347 -
Mepo3g02106 286 PRINTS Glucose/ribitol dehydrogenase family signature 230 247 IPR002347 -
Mepo3g02106 286 Pfam short chain dehydrogenase 8 160 IPR002347 -
Mepo3g02106 286 Pfam short chain dehydrogenase 207 250 IPR002347 -
Mepo3g02106 286 CDD carb_red_PTCR-like_SDR_c 7 286 IPR045313 GO:0016616
Mepo3g02106 286 Gene3D - 3 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02106 Mepo-Chr3 30516783 30519623 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02106 9 246 Miscellaneous Gene Families AT2G29150 27.572 1.43e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02106 K15095 - mtr:25498884 511.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02106 3 30516783 30519623 Mepo3g02106 3 30516783 30519623 ECH
Mepo3g02106 3 30516783 30519623 Mepo1g03691 1 43019714 43044708 PCT
Mepo1g03690 1 43012732 43016160 Mepo3g02106 3 30516783 30519623 PCT