Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02104 ATGTGGAAGGTTACGCGTTTCGCTGCATCATCGCGATCGCGGTTGTTCTCCACTGTGATACCTGCTCCGTGTATGGTTCATAAACGTGGTGCAGATATTCTTCATGATCCTTGGTTTAACAAGGATACTGGATTTCCTTTAACTGAAAGGGATCGTTTGGGGCTTCGAGGCCTCCTTCCTCCTCGTATCATTTCATTTCAGGAGCAATATGACCGTTTTATGAGCTCATATAGATCATTGGAGAAGAACACCCACGGCCAATCGGATAAAATTGTTTCCTTATCCAAATGGAGGATCTTAAATAGACTACATGACAGGAATGAGACTCTGTACTATAGAGCACTTATTGATAACATCAAAGAATTTGCTCCAATAATTTATACTCCTACAGTTGGGTTAGTGTGTCAAAATTATTGTGGGTTATATAGACGCCCACGTGGAATGTATTTTAGTGCCAAAGATAAAGGAGAGATGATGTCGATGATTTATAACTGGCCAGCTCCTCAGGTAGACATGATTGTCTTGACAGATGGTAGTCGTATTCTTGGGTTAGGTGACCTTGGAGTTCAAGGCATTGGAATACCTATAGGAAAACTTGATATGTATGTTGCAGCTGCCGGTATCAACCCACAAAGAATACTTCCGATCATGTTGGATGTTGGAACAAACAATCAAAAGCTACTTGATGATCGCCTTTATTTAGGACTTCGACAACCTAGGTTGGAAGGTGAAGAGTATCTTTCTATTGTGGATGAATTCATGGAAGCTGTTCACGCACGATGGCCGAAGGCTATTGTGCAGTTTGAGGATTTCCAAATGAAGTGGGCTTTTGAAACCCTGAAACGATATCGCCATAAGTTTTGCATGTTTAATGATGATATACAGGGTACAGCTGGTGTTGCACTTGCTGGACTACTGGGAACTGTGAGATCCCAAGGTCGACCGTTGTCTGATTTTACGAAACAAAAGATAGTTATAGCTGGAGCTGGGAGTGCAGGGCTTGGTGTTCTTAACATGGCTGTCCAAGCAGTTTCAAGGATGTCAGGGTGCAGTGAAACAGCAGCAAAAAGTCAATTTTTCTTAATTGATAAAAATGGTCTTGTCACGACAGAAAGGAGTAATCTAGATCCAGCTGCAGTTCCATTTGCTAAAAATCCAAGAGACCTTGAAGGGCTTGCAGAGGGTGCTAGTATCATTGAAGTGGTTAAGAAGGTTAAGCCACATGTGCTGCTTGGATTGTCTGGGGTTGGTGGTGTCTTTAATGAGCAGGTTCTTAAGGCAATGAGAGAATCTGTTTCAACAAAACCGGCTATCTTTGCCATGTCTAATCCCACTATGAATGCTGAGTGCACTGCTATTGATGCATTTAATCATGCTGGAGAAAACATAGTGTTTGCAAGTGGAAGCCCTTTTGAAAATGTAGATCTTGGAAATGGAAGAGTTGGCCATGTAAATCAAGCCAACAACATGTACCTGTTTCCAGGGATTGGCTTGGGATCACTTCTGTCTGGTGCTCATCATATAACAGATGGAATGTTGCAGGCAGCATCTGAATGCCTTGCTTCATACATGACAGAGGAAGATATCCAAAAAGGAATCTTGTATCCATCCATTGATAGTATACGAAATGTTACAGCAGAGGTTGGGGCTGCTGTTCTACGTGCAGCAATTGCTGAAGGACTGGCTGAAGGACACGGGGGTGTTGGGTCCAAAGAACTTGAACATATGTCAGAAGATGATACTGTGGAGTATGTCAGAGGAAATATGTGGTACCCTGAGTATTGCCCTCTAGTTCATGAAAAATGA 1806 0.4247 MWKVTRFAASSRSRLFSTVIPAPCMVHKRGADILHDPWFNKDTGFPLTERDRLGLRGLLPPRIISFQEQYDRFMSSYRSLEKNTHGQSDKIVSLSKWRILNRLHDRNETLYYRALIDNIKEFAPIIYTPTVGLVCQNYCGLYRRPRGMYFSAKDKGEMMSMIYNWPAPQVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDMYVAAAGINPQRILPIMLDVGTNNQKLLDDRLYLGLRQPRLEGEEYLSIVDEFMEAVHARWPKAIVQFEDFQMKWAFETLKRYRHKFCMFNDDIQGTAGVALAGLLGTVRSQGRPLSDFTKQKIVIAGAGSAGLGVLNMAVQAVSRMSGCSETAAKSQFFLIDKNGLVTTERSNLDPAAVPFAKNPRDLEGLAEGASIIEVVKKVKPHVLLGLSGVGGVFNEQVLKAMRESVSTKPAIFAMSNPTMNAECTAIDAFNHAGENIVFASGSPFENVDLGNGRVGHVNQANNMYLFPGIGLGSLLSGAHHITDGMLQAASECLASYMTEEDIQKGILYPSIDSIRNVTAEVGAAVLRAAIAEGLAEGHGGVGSKELEHMSEDDTVEYVRGNMWYPEYCPLVHEK 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02104 601 PANTHER MALIC ENZYME-RELATED 18 594 - -
Mepo3g02104 601 Pfam Malic enzyme, NAD binding domain 294 557 IPR012302 GO:0051287
Mepo3g02104 601 ProSitePatterns Malic enzymes signature. 290 306 IPR015884 GO:0004471
Mepo3g02104 601 SMART Malic_M_2 294 557 IPR012302 GO:0051287
Mepo3g02104 601 CDD NAD_bind_1_malic_enz 294 592 - -
Mepo3g02104 601 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 294 598 IPR036291 -
Mepo3g02104 601 PIRSF ME 3 600 IPR001891 GO:0004470|GO:0004471
Mepo3g02104 601 FunFam Malic enzyme 28 291 - -
Mepo3g02104 601 Gene3D - 292 601 - -
Mepo3g02104 601 Pfam Malic enzyme, N-terminal domain 104 284 IPR012301 GO:0004471
Mepo3g02104 601 SMART malic_2 104 284 IPR012301 GO:0004471
Mepo3g02104 601 Gene3D - 28 291 IPR037062 GO:0004471
Mepo3g02104 601 PRINTS Malic enzyme signature 324 340 IPR001891 GO:0004470|GO:0004471
Mepo3g02104 601 PRINTS Malic enzyme signature 265 283 IPR001891 GO:0004470|GO:0004471
Mepo3g02104 601 PRINTS Malic enzyme signature 433 449 IPR001891 GO:0004470|GO:0004471
Mepo3g02104 601 PRINTS Malic enzyme signature 110 134 IPR001891 GO:0004470|GO:0004471
Mepo3g02104 601 PRINTS Malic enzyme signature 290 306 IPR001891 GO:0004470|GO:0004471
Mepo3g02104 601 PRINTS Malic enzyme signature 170 199 IPR001891 GO:0004470|GO:0004471
Mepo3g02104 601 PRINTS Malic enzyme signature 206 228 IPR001891 GO:0004470|GO:0004471
Mepo3g02104 601 FunFam Malic enzyme 292 601 - -
Mepo3g02104 601 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 13 293 IPR046346 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02104 Mepo-Chr3 30505557 30512293 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02104 K00028 - gmx:100795823 1055.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02104 3 30505557 30512293 Mepo3g02104 3 30505557 30512293 ECH
Mepo3g02104 3 30505557 30512293 Mepo1g03689 1 43002579 43012147 PCT