Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01992 ATGTCAGGTTTGTATAATCAGAACTTCTCTCATGCTAGAGCAGCTTCTCCTCAGATTAGACCCAGCTCAGAAGTTGACAGTCAGTATCTGTCAGAGTTGCTGGCAGAACATCAAAAGCTTGGACCCTTTCTGCAAGTGCTTCCTATATGTAGCCGCCTCTTGAATCAAGAAATACTAAGAGTTTCTGGAATGCTGTCCAACCAAGGTTTTGGTGACTTTGATAGACTGCAGCATAGAAGTCCTAGTCCTATGGCTTCTTCAAACCTCATGTCAAATGTCTCTGGGACAGGAATGGGTGCATGGAATAGTCTTCAGCAGGAGAGATTATGTGGACCGCCTGGAATGAATATGGATTGGCAAAGTGCACCTGCAAGTCCTAGTTCATTCACTGTTAAGCGAATATTGCGCTTGGAAATTCCAGTAGACACATTCCCCAATTTTAATTTTGTTGGAAGACTTCTGGGACCTAGAGGCAATTCTTTGAAACGGGTAGAAGCTACTACTGGTTGCCGCGTGTATATTAGAGGAAAGGGATCGATTAAAGATCCGGAAAAGGAAGACAAATTACGAGGAAGACCAGGCTATGAGCATCTCAATGAAAATCTACACATATTGATTGAGGCTGATTTACCTGCTAATGTTGTTGACATAAGGCTCAGACAGGCTCAGGAAATCATAGAAGAACTGCTCAAACCTGTGGACGAGTCACAAGACTTTATTAAGAGGCAGCAGTTGCGCGAATTAGCTCTGCTGAATTCAAATTTCAGAGAAGAGAGTCCAGGGCCAAGTGGCAGTGGCAGTGTGTCCCCATTCAATTCAAGCGGAATGAAACGTGCGAAGCCGGGTCGCTGA 852 0.4448 MSGLYNQNFSHARAASPQIRPSSEVDSQYLSELLAEHQKLGPFLQVLPICSRLLNQEILRVSGMLSNQGFGDFDRLQHRSPSPMASSNLMSNVSGTGMGAWNSLQQERLCGPPGMNMDWQSAPASPSSFTVKRILRLEIPVDTFPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPEKEDKLRGRPGYEHLNENLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELALLNSNFREESPGPSGSGSVSPFNSSGMKRAKPGR 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01992 283 MobiDBLite consensus disorder prediction 1 21 - -
Mepo3g01992 283 Pfam Homodimerisation region of STAR domain protein 26 72 IPR032377 -
Mepo3g01992 283 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 138 256 IPR036612 GO:0003723
Mepo3g01992 283 Pfam KH domain 148 187 IPR004088 GO:0003723
Mepo3g01992 283 ProSiteProfiles Type-1 KH domain profile. 148 205 - -
Mepo3g01992 283 PANTHER RNA-BINDING PROTEIN RELATED 23 277 IPR045071 -
Mepo3g01992 283 MobiDBLite consensus disorder prediction 254 283 - -
Mepo3g01992 283 MobiDBLite consensus disorder prediction 256 274 - -
Mepo3g01992 283 Gene3D K Homology domain, type 1 20 262 IPR036612 GO:0003723
Mepo3g01992 283 SMART kh_6 131 231 IPR004087 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01992 Mepo-Chr3 29177058 29183548 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01992 K14945 - gmx:100816420 508.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g01992 3 29177058 29183548 Mepo3g01992 3 29177058 29183548 ECH
Mepo3g01992 3 29177058 29183548 Mepo1g04764 1 55637771 55641655 PCT