Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01980 ATGGGGAATTGCTTGGCCAAGTCTCGGGATAGGGATAATGATTCTGATCAACATGTGGAGTTTGCTGCCGGTAATGTGGCACTTATTACCACCAAAGAAGCTTGGGACCAAAAGTTGGAAGAAGCAAAGAAGGATGGCAAAATTGTGATTGCAAATTTCAGCGCAGTGTGGTGCGGGCCTTGCAAGGTGATTGCACCATATTACTGCGAGATGTCTGAGAAATACACATCTATGATGTTCCTATTAGTTGATGTGGATGAACTAACTGATTTCAGCACTTCATGGGACATCAAAGCCACACCAACTTTCTTCTTTCTTAAAGATGGACAACAACTTGACAAGCTTGTTGGAGCCAACAAGCCGGAGCTTGAGAAGAAACTTGTTGCCATTGCTGATTCAGTTCCTCAGAATAAGCAGTGA 420 0.4357 MGNCLAKSRDRDNDSDQHVEFAAGNVALITTKEAWDQKLEEAKKDGKIVIANFSAVWCGPCKVIAPYYCEMSEKYTSMMFLLVDVDELTDFSTSWDIKATPTFFFLKDGQQLDKLVGANKPELEKKLVAIADSVPQNKQ 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01980 139 ProSitePatterns Thioredoxin family active site. 50 68 IPR017937 -
Mepo3g01980 139 CDD TRX_family 39 127 - -
Mepo3g01980 139 Gene3D Glutaredoxin 1 138 - -
Mepo3g01980 139 Pfam Thioredoxin 28 126 IPR013766 -
Mepo3g01980 139 PRINTS Thioredoxin family signature 96 107 - -
Mepo3g01980 139 PRINTS Thioredoxin family signature 57 66 - -
Mepo3g01980 139 PRINTS Thioredoxin family signature 49 57 - -
Mepo3g01980 139 ProSiteProfiles Thioredoxin domain profile. 21 132 IPR013766 -
Mepo3g01980 139 SUPERFAMILY Thioredoxin-like 22 130 IPR036249 -
Mepo3g01980 139 PANTHER THIOREDOXIN 26 127 - -
Mepo3g01980 139 FunFam Thioredoxin 23 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01980 Mepo-Chr3 29042335 29047183 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01980 K03671 - gmx:100813401 249.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g01980 3 29042335 29047183 Mepo3g01980 3 29042335 29047183 ECH
Mepo3g01980 3 29042335 29047183 Mepo1g04760 1 55610773 55612725 PCT