Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01975 ATGGTAGGGAAGAAAGGAAACCAATTTGTGGTGAACGGTCAACCTTTCTATATAAATGGATTCAACACATACTGGTTGATGATGTTTGCTGCAGATGACTCCACCAGAGGAAAAGTCACTGAGGTTTTCAAACAAGCATCCTCACTTGGTATGACAGTTTGTAGAACCTGGGCTTTCAATGATGGCCAATCACGGGCCCTACAGAAATCCCCTGCAGTTTATGACGAAGAAGTGTTCAAGGCTTTGGACTTTGTGGTAAGTGAAGCAAAGAAATACAAAATCAGGCTGATATTATCATTGGCCAACAATTGGGAGGCATATGGTGGAAAATCACAATATGTGAAATGGGGCAAAGATGCTGGCCTTAACTTGACCTCTGATGATGACTTCTACTCACATTCAACCCTTAGAAGCTATTACAAGTCTCATGTTAAGGCAAGTTCCTTTACTGTGCTCAATAGAGTTAACACATTCACAAATATCACTTATAAGGAAGATCCTACCATTTTTGCTTGGGAATTGATGAATGAGCCTAGATGCAACTCAGATCCCACAGGTGACAAGTTACAGGATTGGATACAAGAAATGGCATTCCATGTGAAGAAAATTGATCCAAAACACCTAGTGGAGATTGGACTAGAAGGATTTTATGGCCCTTCAACACCTCAGAGACTTCAGTTCAATCCAAATACATATGCTCAACAAGTTGGAACTGATTTTATCAGGAACCACCAAGTTCTTGGTGTAGACTTTGCTTCTGTTCACATGTATGCTGACTCTTGGGTTTCACCACAAATTGCTGATACACATATCCCATTTGTAAAATCATGGATGGATGCACACATAGAGGATGCTGAAAAGTATCTTGGAATGCCAGTTGTTTTTTCTGAGTTTGGTGTATCATCCAAGGATCCTGGCTATAACTCAACTTATAGAGACACACTAATAAGCATTGTTTACAGTTCAATCCTAAACTCCACAAAGAAAGGAGGGAGTGGAGCTGGAAGCCTTTTGTGGCAGGTCTTTCCTGAAGGAACAGATAATATGGATGACGGCTATGCTATTGTTTTCTCAAAATCTCCTTCCACTTCAAGTATTGTAACCCTTCAATCCACGAGGCTTGCTTTGTTCAACTCCTTGTGTTCTACCAGATGCAATTGGAGTTGTAAGAAGAAGAAAATGTTGGAGAAGATACTCTATCATGATGAACTCTAA 1215 0.4025 MVGKKGNQFVVNGQPFYINGFNTYWLMMFAADDSTRGKVTEVFKQASSLGMTVCRTWAFNDGQSRALQKSPAVYDEEVFKALDFVVSEAKKYKIRLILSLANNWEAYGGKSQYVKWGKDAGLNLTSDDDFYSHSTLRSYYKSHVKASSFTVLNRVNTFTNITYKEDPTIFAWELMNEPRCNSDPTGDKLQDWIQEMAFHVKKIDPKHLVEIGLEGFYGPSTPQRLQFNPNTYAQQVGTDFIRNHQVLGVDFASVHMYADSWVSPQIADTHIPFVKSWMDAHIEDAEKYLGMPVVFSEFGVSSKDPGYNSTYRDTLISIVYSSILNSTKKGGSGAGSLLWQVFPEGTDNMDDGYAIVFSKSPSTSSIVTLQSTRLALFNSLCSTRCNWSCKKKKMLEKILYHDEL 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01975 404 Gene3D Glycosidases 1 377 - -
Mepo3g01975 404 PANTHER - 1 395 IPR045053 GO:0004553
Mepo3g01975 404 Pfam Cellulase (glycosyl hydrolase family 5) 12 318 IPR001547 GO:0004553|GO:0071704
Mepo3g01975 404 FunFam Mannan endo-1,4-beta-mannosidase 6 1 378 - -
Mepo3g01975 404 SUPERFAMILY (Trans)glycosidases 4 362 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01975 Mepo-Chr3 29003845 29005889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01975 1 404 Glycoside Hydrolase AT5G01930 71.182 0.0 636
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01975 K19355 - gmx:100805357 753.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g01975 3 29003845 29005889 Mepo3g01975 3 29003845 29005889 ECH
Mepo3g01975 3 29003845 29005889 Mepo1g04757 1 55598445 55600623 PCT