Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01858 ATGCAGCACAACATCCTCACCTCGATCCGAAGCACGAAAATCACGGATGGTTGTAAAAGCAATCAAATCTACGCTCTCAACGCCGCCGCCGCCGCCGCCGATTCTCCGATCAACGCCGTCGTCGGCGGTGGCGATTCCATCGGAGATAAACTCTTCCATCATTTACTAGACCGCTCCAAAACCTCCGGTCGAACTAAACCGGTTGGACCCAAAACCGCCACACTGGAAGCTCTTCTTCCTTGTGGCCTTCCTTCGTCGGAGCTTCTAGAACCTTCGATTGAGCCTTGTTTGAAGCCATTTGATTTGGTTCAAACCCTCGCCGGCGTGCGTCGCCGGATCGAGGGTGAGGGTGGGAAATTTGAAGCGTTTTTGGAGCAGTGTTTGGTTTTTAAGGGGTGTTTTGATAGTAAATTGTTCCGGCGGAGTTTGCGGTCAGCGCGGCAGCATGCTGTTGATGTGCATGAGAAGATTGTGTTGGCTGCTTGGTTGAGGTATGAGAGGAGAGAAGATGAACTTGTTGGTTCTTCTGCAATGGATTGTTGTGGAAGAAAAGTTGAATGTCCTAAGGCTAGTTTGGTTTCAGGGTATGATCATGAATCTGGTTTTGATCATTGTTCGTGTTCGCGAAAAAATATTATTAGTGCTGATAATGTTGATGTGGAATGTGAATGCTCAACTTCTTATGAAGATGGTGATTGCCATGATATGTCTTTTTGTATAGGTGATAGTGAAATTAGGTGTAGTAGATATTTTATGGCGTCGCTTTCGAGGCCTTTTATGACAATGTTGTATGGTGGATTTGTTGAGTCTAGAAGGGAGAACATAAATTTTTCTCTTAATGATTTTTCTGTTGAGGTAATGAGGGCGGTTGAGGTTTTTAGTAGAACCAAGAGGTTGAGTCAGTTTGGGAATGATGTTGTTCTAGGGATGCTTTCTTTTGCGAATAGGTTTTGTTGTACGGAGATGAAATCGGCTTGTGATGCTCATTTGGCTGCTTTGGTATTGGATATGGATGATGCATTGTTGTTGATTGAGTATGGATTGGAGGAGATGGCGTATTTGCTAGTGGCAGCTTGCTTACAGGTGTTTCTGAGAGAGCTCCCTAGCTCGATACAATGTTTAACTGTTATGAGATTGTTTTGTAGTGTAGAGGGTAGAGATAGATTGGCAGCGGTAGGGCATGCGTCATTTTCGTTGTATTGTTTTTTGAGTCAGGTTGCGATGGAGGAAGATATGAAATCTAACACAACAGTGATGCTCTTAGAGAGGTTAGGAGAGTGTGCGGAGAGTGGTTGGCAGAAGCAACTTGCTTATCACCAATTAGGTGTTGTGATGTTTGAGAGAAAAGAATACAAAGATGCACAAAATTGGTTTGAGGCTGCTCTTAAGGAAGGACATATTTATTCTTCAGTGGGTGTTGCAAGGGCCAAATATAAGCGTGGTCACACATATTCATCATACAAGGTGATAAACTCCCTTATTTCTGATCTTAAACCTGTTGGTTGGATGTATCAGGAAAGGTCTTTGTATTGCATCGGGAAGGAAAAAGCGATGGATTTGATCTCTGCAACTGAGTTAGACCCAACTCTTTCTTTTCCATATAAACACCGGGCTGTTTTTTTCTTGGAGGAGAATAAGATTGGAGCTGCCATTTCTGAAATCAATAAAATAATTGGTTTCAAGATTTCTCCTGACTGCCTTGAGTTGAGAGCTTGGTTCTTGATTGCCATGAAGGATTATGAAGGAGCCCTTAGGGATGTCAGGGCAATTTTGACATTGGATCCAAATTATATGATGTTCTATGGGAATATGAAAGGCGATCGCTTGGTAGAACTCCTTCGCCCTGTTGCTCAGAAGTGGAACCAGGCTGATTGTTGGATGCAATTGTATGACAGATGGTCTTCCGTTGATGATATTGGTTCTTTGGCTGTTGTTCACCAGATGTTAGAAAATAACCCGGGGAAAAGTATTTTACGCTTTCGGCAATCTTTACTTCTGTTACGGTTAAATTCTCAGAAGGCAGCCATGCGTAGTCTGCGTCTGGCTAGAAATCATTCTTCTTCAGCACATGAAAGACTTGTCTATGAAGGATGGATATTGTATGACACTGGTCATCGTGAAGAAGCTATAGCAAAGGCTGAGGAGTCGATTTCTATTCAAAGGTCATTTGAAGCTTTCTTTCTCAAAGCCTATGCATTAGCTGACCCGTGTCTTGATTCAGAGTCTTCAAAGAGTGTGATTGATCTCTTGGAGGAAGCTCTTAAATGTCCTTCGGATGGTCTTCGGAAGGGACAGGCACTCAATAATTTAGGGAGTATATATGTAGATTGCGATCAGCTAGACCTTGCTGCTGACTGCTACAAGCATGCACTTAACATCAAGCATACACGAGCACATCAGGGGTTGGCACGTGTATATCATCTTCAACATCAGAACATAGCGGCATATGATGAGATGACAAAGCTGATAGAAAAGGCCCAAAATAATGCATCAGCTTATGAGAAACGTTCAGAATATTGCGATCGTGACCCGGCAAAGAACGATCTTAGTTTGGCAACACAGTTGGATCCTCTAAGGACATATCCGTACCGATATAGGGCGGCAGTGTTAATGGACGATCATAAGGAAACTGAAGCAATTGCAGAGCTTTCAAGGGCCATCAACTTTAAGCCAGAACTGCAACTGTTACATCTTCGAGCGGCATTTTATGAATCAATGGATGATTACGTTTCTACTGTCCAAGACTGTGAAGCGGCCCTTTGTCTTGATCCTAGCCATGCTGAGGTGTTAGAAATTTGTAATAGAGCCCGGCAAAAAATTATTGATGGAAAGTGA 2835 0.431 MQHNILTSIRSTKITDGCKSNQIYALNAAAAAADSPINAVVGGGDSIGDKLFHHLLDRSKTSGRTKPVGPKTATLEALLPCGLPSSELLEPSIEPCLKPFDLVQTLAGVRRRIEGEGGKFEAFLEQCLVFKGCFDSKLFRRSLRSARQHAVDVHEKIVLAAWLRYERREDELVGSSAMDCCGRKVECPKASLVSGYDHESGFDHCSCSRKNIISADNVDVECECSTSYEDGDCHDMSFCIGDSEIRCSRYFMASLSRPFMTMLYGGFVESRRENINFSLNDFSVEVMRAVEVFSRTKRLSQFGNDVVLGMLSFANRFCCTEMKSACDAHLAALVLDMDDALLLIEYGLEEMAYLLVAACLQVFLRELPSSIQCLTVMRLFCSVEGRDRLAAVGHASFSLYCFLSQVAMEEDMKSNTTVMLLERLGECAESGWQKQLAYHQLGVVMFERKEYKDAQNWFEAALKEGHIYSSVGVARAKYKRGHTYSSYKVINSLISDLKPVGWMYQERSLYCIGKEKAMDLISATELDPTLSFPYKHRAVFFLEENKIGAAISEINKIIGFKISPDCLELRAWFLIAMKDYEGALRDVRAILTLDPNYMMFYGNMKGDRLVELLRPVAQKWNQADCWMQLYDRWSSVDDIGSLAVVHQMLENNPGKSILRFRQSLLLLRLNSQKAAMRSLRLARNHSSSAHERLVYEGWILYDTGHREEAIAKAEESISIQRSFEAFFLKAYALADPCLDSESSKSVIDLLEEALKCPSDGLRKGQALNNLGSIYVDCDQLDLAADCYKHALNIKHTRAHQGLARVYHLQHQNIAAYDEMTKLIEKAQNNASAYEKRSEYCDRDPAKNDLSLATQLDPLRTYPYRYRAAVLMDDHKETEAIAELSRAINFKPELQLLHLRAAFYESMDDYVSTVQDCEAALCLDPSHAEVLEICNRARQKIIDGK 944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01858 944 Gene3D Tetratricopeptide repeat domain 420 603 IPR011990 GO:0005515
Mepo3g01858 944 PANTHER ETO1-RELATED 7 940 IPR044631 GO:0010105
Mepo3g01858 944 Gene3D Tetratricopeptide repeat domain 655 827 IPR011990 GO:0005515
Mepo3g01858 944 Coils Coil 816 836 - -
Mepo3g01858 944 SUPERFAMILY POZ domain 226 330 IPR011333 -
Mepo3g01858 944 SUPERFAMILY TPR-like 692 893 IPR011990 GO:0005515
Mepo3g01858 944 SMART BTB_4 234 334 IPR000210 GO:0005515
Mepo3g01858 944 ProSiteProfiles TPR repeat profile. 764 797 IPR019734 GO:0005515
Mepo3g01858 944 Gene3D Potassium Channel Kv1.1; Chain A 223 372 IPR011333 -
Mepo3g01858 944 Gene3D Tetratricopeptide repeat domain 832 944 IPR011990 GO:0005515
Mepo3g01858 944 SMART tpr_5 435 468 IPR019734 GO:0005515
Mepo3g01858 944 SMART tpr_5 764 797 IPR019734 GO:0005515
Mepo3g01858 944 SMART tpr_5 564 597 IPR019734 GO:0005515
Mepo3g01858 944 SMART tpr_5 893 926 IPR019734 GO:0005515
Mepo3g01858 944 SMART tpr_5 690 723 IPR019734 GO:0005515
Mepo3g01858 944 Pfam Tetratricopeptide repeat 765 794 IPR019734 GO:0005515
Mepo3g01858 944 SUPERFAMILY TPR-like 436 603 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01858 Mepo-Chr3 27250916 27258141 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01858 - - pvu:PHAVU_008G094700g 1387.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g01858 3 27250916 27258141 Mepo3g01858 3 27250916 27258141 ECH
Mepo3g01858 3 27250916 27258141 Mepo2g00394 2 4215417 4221124 PCT