Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01806 ATGTCCTTCAACGACGAAACCGCCATTATCTCATGGCGCAAAATCCCCAACCTCAAATGCGACGTCGTTTCACCCAATTCCTATTCCCTTCTCCGCCATAACGCCACACTCACCTTCTCCACCACCGTAGACACCAAATTCGCCTCTATCTCCGTCGCTGAACCCAAAATTCACAACCATTTCGCACCGACACCGTCTCAGCTTCTCAAACACCCACTCGCTGCATTAGCGTTTGTTCCGAGAGATGCCGCTCTCTTCGCCGCCGGAGCATTCGCCGGCGCTGCTGCTAAGACATTCACTGCTCCGCTCGACCGTATCAAGCTCCTCATGCAGACTCATGGTGTGCGGGTCGGGCAAGAAAGTGCTAAGAAGGCAATAAGTTTCGTTGAGGCCATAACAGTTATAGGGAAGGAAGAAGGGATTAGAGGTTACTGGAAGGGAAACCTCCCTCAGGTGATTCGGGTTATACCTTATAGTGCCGTTCAGCTTTTTGCTTATGAACTTTATAAGAAATTATTCACGGGACAGAATGGTGAGCTATCTGTTGTGGCAAGACTTTCAGCAGGTGCTTTTGCTGGCATGACATCCACTTTTATAACTTACCCATTAGATGTTCTGAGATTACGATTAGCTGTTGAACCTGGTTATAGAACCATGTCAGAGGTATGA 669 0.4843 MSFNDETAIISWRKIPNLKCDVVSPNSYSLLRHNATLTFSTTVDTKFASISVAEPKIHNHFAPTPSQLLKHPLAALAFVPRDAALFAAGAFAGAAAKTFTAPLDRIKLLMQTHGVRVGQESAKKAISFVEAITVIGKEEGIRGYWKGNLPQVIRVIPYSAVQLFAYELYKKLFTGQNGELSVVARLSAGAFAGMTSTFITYPLDVLRLRLAVEPGYRTMSEV 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01806 222 ProSiteProfiles Solute carrier (Solcar) repeat profile. 180 222 IPR018108 -
Mepo3g01806 222 Gene3D Mitochondrial carrier domain 83 222 IPR023395 -
Mepo3g01806 222 Pfam Mitochondrial carrier protein 179 215 IPR018108 -
Mepo3g01806 222 Pfam Mitochondrial carrier protein 85 175 IPR018108 -
Mepo3g01806 222 ProSiteProfiles Solute carrier (Solcar) repeat profile. 80 172 IPR018108 -
Mepo3g01806 222 PANTHER SOLUTE CARRIER FAMILY 25 71 220 - -
Mepo3g01806 222 PRINTS Mitochondrial carrier protein signature 147 167 IPR002067 GO:0055085
Mepo3g01806 222 PRINTS Mitochondrial carrier protein signature 85 98 IPR002067 GO:0055085
Mepo3g01806 222 PRINTS Mitochondrial carrier protein signature 195 213 IPR002067 GO:0055085
Mepo3g01806 222 PRINTS Mitochondrial carrier protein signature 98 112 IPR002067 GO:0055085
Mepo3g01806 222 SUPERFAMILY Mitochondrial carrier 84 216 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01806 Mepo-Chr3 26496757 26500448 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01806 47 222 Organic Solute Cotransporters AT5G01500 78.977 4.01e-89 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01806 K14684 - gmx:100778912 319.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g01806 3 26496757 26500448 Mepo3g01806 3 26496757 26500448 ECH
Mepo2g00466 2 5567680 5572046 Mepo3g01806 3 26496757 26500448 PCT