Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01619 ATGGTTGACACAAAGTTGAATTTCAAAGACCAAAAATGGTCACTTCATGGAATGACTGCTCTAGTAACTGGTGGAACCCGAGGCATAGGGTATGCAATTGTGGAAGAGTTAGCAGAATTTGGGGCAAGTGTGCATATATGTACAAGAAATCAAGATGATATTAACAAATGTTTGGAAGAGTGGAAAGGCAAAGGATTTTGTGTGACAGGGTCAACTTGTGATTTATTATCCCGTGACCAACGTCAAAATCTAATGGAAAATGTTGCTTCAATCTTTCAAGGAAAACTCAATATTCTAGTAAATAATGCTGCCACATGTACACATAAGAAAATAATAGATCACACTGCCGAAGATATAGTAACCACAATGGGCACAAATTTTGAGTCTGGTTACCATCTTTGTCAACTAGCATACCCACTTCTAAAAGAATCTGGATATGGAAGCATAGTGTTCATATCTTCTGTTGGAGGTTTAAAAGCATTTGATGCTTGTTCTATCTATGCTGCCTCTAAAGGAGCTGTAAATCAATTGACCAAAAACATAGCATTGGAATGGGCAAAGGATAATATTCGAGCAAATGTTGTAGCACCTGGAGCTGTTAAGACTGACCTTTTGGACTCTATCCTGAAATCTAAGGCTTTTGATAAGATCACCATGGATGATCTAGCATCTAGTGCACCTGTTGGTCGTGTTGGAGAACCTAAGGACATATCAGCATTGGTTGCTTTTCTTTGCCTCCCAGCTGCTTCATATGTCACTGGACAGATTATCACTGCAGATGGAGGTTTAATACTTTAA 798 0.3872 MVDTKLNFKDQKWSLHGMTALVTGGTRGIGYAIVEELAEFGASVHICTRNQDDINKCLEEWKGKGFCVTGSTCDLLSRDQRQNLMENVASIFQGKLNILVNNAATCTHKKIIDHTAEDIVTTMGTNFESGYHLCQLAYPLLKESGYGSIVFISSVGGLKAFDACSIYAASKGAVNQLTKNIALEWAKDNIRANVVAPGAVKTDLLDSILKSKAFDKITMDDLASSAPVGRVGEPKDISALVAFLCLPAASYVTGQIITADGGLIL 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01619 265 PANTHER TROPINONE REDUCTASE 11 263 IPR045000 GO:0016491
Mepo3g01619 265 Pfam Enoyl-(Acyl carrier protein) reductase 26 263 - -
Mepo3g01619 265 Gene3D - 2 265 - -
Mepo3g01619 265 FunFam Short-chain dehydrogenase reductase 6 265 - -
Mepo3g01619 265 PRINTS Glucose/ribitol dehydrogenase family signature 227 247 IPR002347 -
Mepo3g01619 265 PRINTS Glucose/ribitol dehydrogenase family signature 167 186 IPR002347 -
Mepo3g01619 265 PRINTS Glucose/ribitol dehydrogenase family signature 188 205 IPR002347 -
Mepo3g01619 265 PRINTS Glucose/ribitol dehydrogenase family signature 19 36 IPR002347 -
Mepo3g01619 265 PRINTS Glucose/ribitol dehydrogenase family signature 94 105 IPR002347 -
Mepo3g01619 265 PRINTS Glucose/ribitol dehydrogenase family signature 141 157 IPR002347 -
Mepo3g01619 265 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 17 264 IPR036291 -
Mepo3g01619 265 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 94 105 IPR002347 -
Mepo3g01619 265 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 155 IPR002347 -
Mepo3g01619 265 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 167 186 IPR002347 -
Mepo3g01619 265 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 154 182 IPR020904 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01619 Mepo-Chr3 24079133 24082892 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01619 10 263 Miscellaneous Gene Families AT2G29330 55.906 6.98e-102 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01619 K08081 - gmx:100306108 392.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g01619 3 24079133 24082892 Mepo3g01619 3 24079133 24082892 ECH
Mepo3g05456 3 68291701 68294871 Mepo3g01619 3 24079133 24082892 ECH