Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00877 ATGTTCTGGCTTCTCACTTTTCAGGTAGCAGCTAGGGTCACGCCACGTAATGCTGATAAGGACGAATGGTTTGTTGTAAAAGTGATTCATTTTGATAAGGAATTAAAGGAATTTGAAGTACTTGATGAGGAACCTGGTGATGATGAAGATAGCAGTGGCCAAAGACAGTACAAGCTTCCGATGGGAAATATCATTCCTTTCCCTAAGAGTAATGATCCTTCAAGTGCCCAAGATTTTCCACCTGGAAAACATGTCTTGGCAGTTTATCCAGGAACTACTGCACTTTATAAAGCAACAGTTGTTCAAGGCCATCGCAGGAGGAAGACAGATGATTATGTGTTGGAATTTGATGATGATGAAGAAGACGGGTCTCTACCTCAAAGGACAGTGCCCTTCCACACAGTGGTTCCTCTGCCAGAAGGACATCGTCAATAA 435 0.4276 MFWLLTFQVAARVTPRNADKDEWFVVKVIHFDKELKEFEVLDEEPGDDEDSSGQRQYKLPMGNIIPFPKSNDPSSAQDFPPGKHVLAVYPGTTALYKATVVQGHRRRKTDDYVLEFDDDEEDGSLPQRTVPFHTVVPLPEGHRQ 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00877 144 Gene3D - 8 69 - -
Mepo3g00877 144 FunFam SAGA-associated factor 29 isoform X6 71 144 - -
Mepo3g00877 144 Gene3D - 70 144 - -
Mepo3g00877 144 FunFam SAGA-associated factor 29 isoform X6 7 70 - -
Mepo3g00877 144 Pfam SGF29 tudor-like domain 8 139 IPR010750 -
Mepo3g00877 144 CDD Tudor_SGF29_rpt1 8 71 IPR047288 -
Mepo3g00877 144 CDD Tudor_SGF29_rpt2 79 138 IPR047287 -
Mepo3g00877 144 PANTHER UNCHARACTERIZED 8 144 IPR037802 GO:0000124
Mepo3g00877 144 ProSiteProfiles SGF29 C-terminal domain profile. 1 144 IPR010750 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00877 Mepo-Chr3 12359143 12362351 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00877 K11364 - gmx:100526864 269.626