LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo3g00816	ATGTTGAAATCTAAGAAAGGGTTATGTTCAAGTAAAAATCCTTTGTGGGTTGCAGCTTTTTTCTTCAAACAACTTAAGAAACCTCAAATTTTGGATAGTGACATTTCTTCTTCTGTGGACCAGATTATGCATCATGAAATAGAAGCTGTTTCCTACAGAGTGCTTGGATATCTCCTTTCTGGAGTTGTTAAAATATACTCAAAGAAGGTTGAGTTTCTACTCGATGATTGCAATAAGGTGCTCCTTGGAATCAACAAATTTGTGATCAAAACAAAGAACGACACACCCGTGGAAAAATTGCGCATGTCTTTTATCATGCCTGATACATTTGATTTGGATGCTATTGATTTGGGTATACTTGAAGATACTTCTCGATTCCATACTGCTCAGCCAGAACAAATCACTCTAAAAGATGTTTTGTCTAATACTGCGGGATTCATGCAGTTTTCTCAGGAGAGGTTTGACGATTTTGGTTTGGGTGAAACTAGCTGCTCTCTTGACCACCTTATGGCAGAAAATGTTCTTGAAACTCAATTGCTGAACTTTGACTTCGAAGCTTTTCCATCGAGTAGTTCAACAAATTTACTGGCAAGCAAGGATATATTGCAAAGCCACATATCCAATCAAAATGTGGACGAGTTCCATGAAGAGAGTAGAGTCTCTCAAGAGGAATCAATAGATATCAGTATGTTTTTGGGAACACAGAAGGAAGCGGTTTTACCTTCTGCATCTTTTAATGAGTCTCGGCAAATTGGTATCGAGCATAATATGGCAATGGAATCATTAAGATCATTATGCGAAATGGATCAGGAAAATGTCTGCGTTGATGAACCATTAGCTTTCCAAGAAAATGAAAATTTTCATCACAACCAGTCTTCTGTTGTCAAAGAGAGCGTCGGAGAACTCATTGAAGAGTCTATTGTTGATCCAACTCCTCAGTCTAAGTTTCAAGGAAATTTAGAAGTTCAAAAAAAGGTTTCATTTGAACATGGACAATCTAGTGTTAATCCTGCAGAGTCCACGATTGTGGATCCAACTCCTCAATCTAAGTTTCAAGGCAGTTCAATTGGAAGGCCAAAACCAGGTTCTACTTCTACTACGTCGGAGTTTAAGCTTATTCCTACACCAACTGCAACCGAATCTGCTCGCTTTTCAAAGAAAAGAAAATTTGTTATTGATAAAACGATGGTCTTGTCTACTGAGGTACTCAAAAGGAGCATACTTGATGCAAGTGACTTGGTCTCTGTCCACAGACCATTACGTCTCTCTTTGCTTGATAAACAGAGAAAATATCAGCTTTCCAGTCTTCTGGATAGATTCAATGAATCTCTGTTTACTTGCCACTCCGCAAAGCTTAAGTCCTTGTTTTCAAGTAAGAAAATGAAGATTCCTAACTCTCTTAAGATAAAGGAAACTCGACCAGAGTCAGGTGTGTCGGAATCTCGATTTGTTCGCATTCCAGACCATATCGAAATTCCTCCAAGGTTCTCAGAAGCTATAAGGGAGTTAGATGTGTCTCAGTCTCAAACTTGTGGTAGTTCAGATCATATGGCGGCTGCTCCAGAAACACCTCCATTGTGCCCAAATGTGAAAGTTAGGACAGCTAAACAACACGAGATAACTGAACCTCAAAATTCAGATGATTTTGGGCCTTCAAGTCCCCATGAGAGAGAGCAATCTTTGGAAAGGAATGCTGATATGGTGGAAGAGTTCAATGTTGAAACCTCAAATACATATGAAACAATGGATCATGAGGAAAGCTTTACAGTGGATGAAGATCTCAATCTCATGAATGAGGAGATGAACTCACCTGAAACTGAGAATTCAAACATGTCTGGGTGGTCTGAGCGAACCAGGAAGGTAGCCTCATACTTGAGCAAAACTTTTCAAGATCCAGGGAAACAAAAAGAGGCGGGATCTGTGAACTTGTCCCAAGTTTCACATGGAAGAACCCGGAAAGAATCAGCAAGGCTTTTTTATGAAATCCTGGTTTTGAAAACTACCAACTATGTGGACGTGCAACAAAACGAAGCGTATGGTGATATTGCTGTTAAGAAACTCCCCAAACTTGATAAAACTTTTGGTGTTTGA	2091	0.3931	MLKSKKGLCSSKNPLWVAAFFFKQLKKPQILDSDISSSVDQIMHHEIEAVSYRVLGYLLSGVVKIYSKKVEFLLDDCNKVLLGINKFVIKTKNDTPVEKLRMSFIMPDTFDLDAIDLGILEDTSRFHTAQPEQITLKDVLSNTAGFMQFSQERFDDFGLGETSCSLDHLMAENVLETQLLNFDFEAFPSSSSTNLLASKDILQSHISNQNVDEFHEESRVSQEESIDISMFLGTQKEAVLPSASFNESRQIGIEHNMAMESLRSLCEMDQENVCVDEPLAFQENENFHHNQSSVVKESVGELIEESIVDPTPQSKFQGNLEVQKKVSFEHGQSSVNPAESTIVDPTPQSKFQGSSIGRPKPGSTSTTSEFKLIPTPTATESARFSKKRKFVIDKTMVLSTEVLKRSILDASDLVSVHRPLRLSLLDKQRKYQLSSLLDRFNESLFTCHSAKLKSLFSSKKMKIPNSLKIKETRPESGVSESRFVRIPDHIEIPPRFSEAIRELDVSQSQTCGSSDHMAAAPETPPLCPNVKVRTAKQHEITEPQNSDDFGPSSPHEREQSLERNADMVEEFNVETSNTYETMDHEESFTVDEDLNLMNEEMNSPETENSNMSGWSERTRKVASYLSKTFQDPGKQKEAGSVNLSQVSHGRTRKESARLFYEILVLKTTNYVDVQQNEAYGDIAVKKLPKLDKTFGV	696

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo3g00816	696	Pfam	Conserved region of Rad21 / Rec8 like protein	638	689	IPR006909	-
	Mepo3g00816	696	MobiDBLite	consensus disorder prediction	541	565	-	-
	Mepo3g00816	696	MobiDBLite	consensus disorder prediction	330	370	-	-
	Mepo3g00816	696	SUPERFAMILY	"Winged helix" DNA-binding domain	617	690	IPR036390	-
	Mepo3g00816	696	CDD	Rad21_Rec8_M_AtSYN1-like	383	459	-	-
	Mepo3g00816	696	PANTHER	SCC1 / RAD21 FAMILY MEMBER	9	693	IPR039781	GO:0007062\|GO:0008278
	Mepo3g00816	696	MobiDBLite	consensus disorder prediction	551	565	-	-
	Mepo3g00816	696	Pfam	N terminus of Rad21 / Rec8 like protein	15	94	IPR006910	GO:0005515
	Mepo3g00816	696	Gene3D	Structural maintenance of chromosome 1. Chain E	616	694	IPR023093	-
	Mepo3g00816	696	FunFam	Sister chromatid cohesion 1 protein 4	617	694	-	-
	Mepo3g00816	696	MobiDBLite	consensus disorder prediction	629	648	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo3g00816	Mepo-Chr3	11614712	11622530	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo3g00816	K06670		-	qsu:112016663	352.058