Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00766 ATGACTAATAAAAAAGCATTACCAGTTCCAAATTTTGGTAGTGACTTTTACTTTAGTTACCACAATCATCCATCACAAAAGATGAGAATTCTAGACTTGTTACCACCCTCCGATGGCAATGGTTCTTCGATGGAAGAAGAACCTTTACCTCAGGATGCAGATTATAATCTCAGTCTCAGCGACGAGCTAGAGACATCGATCTTGGCGAGATTTCCAAGATCACAACATTGGAAACTATCTTTTCTAAACAAGAGATTTTTAACTCTGATGAAAAGCGGCGAGATCTACAAAATAAGGAAAGAGTTAGGACTCAAAGAACCATCCGTTTTTATGTTAGCTAGTGGCGAAAGCAATTGGTGGGGTATGGAATGGCCTTTCAAATCAAGCAGGAAGCTTCCAAGGATTCAATCAGATTACAGCTTTGAATTTGGTGATAAAGAATCATTTTCAGCAGGGTCGGAGTTATTTGTTTCGGGCAAAGAATTCGACGGACCTGTTATTTGGCGATATGATTCGGATAGGAATGAATGGTTCAAAGGTCCATTCATGATTAATCCTAGGTGCCTATTTGCTTCAGCTAGTTCTGGTAATTTTGCTTTTGTTGCAGGTGGTTTGGAAACAAACACCTATAGTGAAATATTGGATACTGCTGAGAAATATGATTCGAAAACGAAAACTTGGAAACCTTTACCGAAGATGAATTCAAAGAGAAAATTTTGTTCAGGATGTTACATGGACAAGAGATTCTATGTTATTGGTGGACAGGACGAGAATCGAAAGGATCTCATTTCCTGTGAGTTTTTCGACGAAGAAACAAACACATGGAATTTGATTCCTGATATGTTGAAAGACATTCCACTTTCGGATTCGCAATCTCCCCCTCTAATAGCTGTTGTCAATAATGGCCTTTATACACTCGATGCTTCTACTAATGAGCTGAAAGTGTATTTGAAAGGGATCAATAAATGGAAAAAGTTAGGCGTTGCGCCTGTGAGAGCTGATGCACAAGGTGGTTGGGGTGTTGCGTTTAAATCGCTCGGTGATGAGTTACTTGTTATTGGTGCACCTTCTGTTTCGCATAAAGAACGGGCTTTGGCGATTTATACTTGTTGTCCTGATCCTGAGGGTGAGAAATTGAAATGGAAGCAAATTGATTGTGGAAGTGTTCAGCTTAATCATTTCATTAGGAATTGTGCTGTGATGATGGAAAGTACATGA 1218 0.3924 MTNKKALPVPNFGSDFYFSYHNHPSQKMRILDLLPPSDGNGSSMEEEPLPQDADYNLSLSDELETSILARFPRSQHWKLSFLNKRFLTLMKSGEIYKIRKELGLKEPSVFMLASGESNWWGMEWPFKSSRKLPRIQSDYSFEFGDKESFSAGSELFVSGKEFDGPVIWRYDSDRNEWFKGPFMINPRCLFASASSGNFAFVAGGLETNTYSEILDTAEKYDSKTKTWKPLPKMNSKRKFCSGCYMDKRFYVIGGQDENRKDLISCEFFDEETNTWNLIPDMLKDIPLSDSQSPPLIAVVNNGLYTLDASTNELKVYLKGINKWKKLGVAPVRADAQGGWGVAFKSLGDELLVIGAPSVSHKERALAIYTCCPDPEGEKLKWKQIDCGSVQLNHFIRNCAVMMEST 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00766 405 SMART kelc_smart 200 247 IPR006652 GO:0005515
Mepo3g00766 405 SMART kelc_smart 248 301 IPR006652 GO:0005515
Mepo3g00766 405 SMART kelc_smart 154 197 IPR006652 GO:0005515
Mepo3g00766 405 Gene3D - 97 385 IPR015915 GO:0005515
Mepo3g00766 405 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 58 401 - -
Mepo3g00766 405 Pfam Kelch motif 186 234 IPR006652 GO:0005515
Mepo3g00766 405 Pfam Kelch motif 237 281 IPR006652 GO:0005515
Mepo3g00766 405 FunFam F-box/kelch-repeat protein SKIP11 101 386 - -
Mepo3g00766 405 SUPERFAMILY Kelch motif 151 356 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00766 Mepo-Chr3 10771774 10774466 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00766 57 278 Miscellaneous Gene Families AT4G33900 26.754 1.98e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00766 - - gmx:100777338 628.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g00766 3 10771774 10774466 Mepo3g00766 3 10771774 10774466 ECH