Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00106 ATGGCTGCTAAGGGTCCAGGTCTCTACTCTGACATCGGCAAGAAAGCTAGAGATCTGTTGTTCAAGGACTACAACAGTGACCAGAAGTTCACCGTTTCTACCTACTCACCCACTGGAGTTGCTATCACATCATCTGGTACAAAGAAAGGTGAACTGTTTGTGGGCGATGTTAATACCCAGTTGAAGAACAAAAACTACACCGCTGATATCAAAGTAGACACAGAATCTAATCTTTTCACAACTATCACTGTCACCGAACCTGCTCCTGGTGTGAAGGCTATTATAAGCTGCAAAGTTCCTGATCCAGCATCTGGGAAGGTGGAACTACAATACTTGCATGACTATGCTGGAATAAGTGGCAACATTGGGTTGAAAGCAAACCCAGTTGTCAACTTATCTGGTGTTTTTGGAACTAATGCTCTTGCATTTGGTGGTGATATTTCTTATGATACCAAACTTAGAGAGCTAACAAAATCTAATTTTGGAGTGAGCTTTATCAAAGAAGACTTGCTTGGAGCATTTACTCTGAATGAGAAAGGTGATGTGCTGAATGCTTCATACTATCATGTTATTAACCCCGTGACCAACACTGCTGTTGGTGTTGACATGGGTCACAGATTCTCAACTAAAGAGAACAACTTCACACTTGGTGTCCAACATGCATTGGATCCATTGACAACATTGAAGGGTCGCATCACCAACTCAGCCAAGGCAAGTGCCCTTATCCAGCACGAGTGGCGTCCTAAATCACTCATCACCATTTCTACTGAGCTAGACACCAAGGCCATTGAAAAGAGTGCTAAGGTTGGATTGAGTTTGGTTCTCAAACCCTGA 834 0.4305 MAAKGPGLYSDIGKKARDLLFKDYNSDQKFTVSTYSPTGVAITSSGTKKGELFVGDVNTQLKNKNYTADIKVDTESNLFTTITVTEPAPGVKAIISCKVPDPASGKVELQYLHDYAGISGNIGLKANPVVNLSGVFGTNALAFGGDISYDTKLRELTKSNFGVSFIKEDLLGAFTLNEKGDVLNASYYHVINPVTNTAVGVDMGHRFSTKENNFTLGVQHALDPLTTLKGRITNSAKASALIQHEWRPKSLITISTELDTKAIEKSAKVGLSLVLKP 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00106 277 Gene3D Porin 1 276 IPR023614 -
Mepo3g00106 277 PANTHER VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL 1 277 IPR001925 GO:0005741|GO:0008308|GO:0098656
Mepo3g00106 277 Pfam Eukaryotic porin 5 270 IPR027246 GO:0005741|GO:0055085
Mepo3g00106 277 CDD Porin3_VDAC 6 276 IPR001925 GO:0005741|GO:0008308|GO:0098656
Mepo3g00106 277 ProSitePatterns Eukaryotic mitochondrial porin signature. 220 242 IPR001925 GO:0005741|GO:0008308|GO:0098656
Mepo3g00106 277 FunFam Outer mitochondrial membrane protein porin 2 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00106 Mepo-Chr3 1503373 1508132 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00106 K15040 - gmx:100777928 431.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g00106 3 1503373 1508132 Mepo3g00106 3 1503373 1508132 ECH
Mepo3g00106 3 1503373 1508132 Mepo1g01293 1 12730471 12732261 ECH