Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g05115 ATGGCGCCCAAGTTGTTTCTCTCTCTTCTAAGTTTCTCTCTCCTCACCCTCTCCGTTGCCGCTCGTCCCTACGTTCTCGTCCTTTCTCAGGAAGACTTCAAAGACGAAGTCCCAGCTGATTCCGATTCCTCTTCCGCCGAGTGGGATGAATTCGGCGACTCCGACTCACACAAGTCCGAAGAAGATCTCGATCCTGGCTCATGGCGCCAAATTTTCGAACCCTCTTCCACCGACCCTCAACCCCAACCCCAATCCGATACGGAGGCTCTCTACTACTCGGCCGTCACTAAGCTAATGACTGGGGATGCCAGAATCATAGAAGAAGGCTCCGGCGAGATCGAAACAGCTGCAGAATCTGGTCACCCGGCTGCACAATCAGTGTTAGGGTTTTTGTGCGGAATAGGTCTTTTCAGAGAGAGGAACAAACAGAAAGCATTCGTTTATCATCACTTTGCTTCCGAGGGTGGCAATATGCAATCCAAAATGGCTCTCGCTTATCTCTACACTCGTCAAGATATGTTTGATAAATCCGTTAAGCTTTATGCTGAATTGGCAGAAGTTGCTGTAAATAGTTTTCTCATTTCCAAAGATTCTCCTGTCATCGAACCTGTTAGGCTACACAATGGAGCTGAAGAGAACAAAGAGGCACTCAGAAAATCTAAAGGGGAAGAGGATGAAGACTTTCAGATTCTTGAGTATCAGGCCCAGAAAGGGAATGCTGCTGCTATGTACAAAGTCGGTCTCTTTTACTACTTTGGCCTTCGTGGTTTGAGGCGTGACCATTCTAAGGCACTCTCATGGTTCCTTAAGGCTGTGGACAAAGGAGAGCCTCGCTCTATGGAACTTCTTGGAGAGATATATGCCAGGGGAGCAGGTGTTGAGAGAAACTACACCAAAGCTTTTGAATGGCTTACTCTTGCATCCAAACACCACCTCTATTCTGCTTATAATGGCATCGGTTATTTGTACGTCAAAGGCTATGGAGTCGACAGCAAAAATTACACTAAAGCAAAGGAGTATTTTGAAAAGGCTGCTGATAACGAAGAGGTTGGAGGCCATTATAACCTGGGTGTCTTGTATCTCAAAGGGATTGGAGTGAAAAGAGATGTCAAGTTGGCATGTAAATTCTTTATTGTGGCTGCCAACCATGGTCAACCGAAGGCTTTCTACCAGCTTGCAAAAATTTTCCATCTTGGTGTTGGGTTCAAGAAGAACGTTCCATTGGCTACTGCCCTATACAAATTAGTTGCAGAAAGAGGTCCATGGAGTTCTTTGTCCAGATGGGCACTAGAAGCATACCTAAAAGGCGATATTGGCAAGGCCTATATGTTGTACTCAAGAATGGCTGAGATGGGCTATGAGGTGGCACAGAGCAATGCTGCTTGGATTCTCGACAAATATGGAGAACGAAGCATGTGTATGGGTGAATCTGGATTTTGCACCGATGCAGAAAGGCATCAGAGGGCACATTCTTTGTGGTGGCAAGCTTCTGAGCAGGGTAATGAACACGCTGCTTTACTAATTGGAGATGCATATTACTATGGCCGGGGAACTGCCAGGGATTATGACCGAGCTGCTGAGGCTTACATGCATGCCAAATCACAATCTAATGCACAAGCCATGTTCAATCTTGGGTACATGCATGAGCATGGCCAAGGACTTCCTCTTGACCTTCATCTAGCCAAGCGTTACTACGATGAAGCTCTAGAGCATGATCCTGCAGCTAAGTTGCCGGTCACACTGGCTCTTACAAGCTTGTGGGTTCGGAAGAACCATGCTGACAGTTTATTGGTCCACATAATTGATTCTTTGCCGGATGTCTATCCAAAATTAGAAGCTTGGGTAGAGAATGTGCTTTTGGAGGAGGGAAATGCAACAATTCTAACCCTCTTTGCGTGCCTCCTAACTGTGCTGTATCTGCGGGAGAGGCAACGAAGGCAAGCTGTTGTTGTCGCTGGAGAGGCCGCTGAGCCAAATCGCCCTAATGAACTTGGTGTGCCTGCACCCATCTAG 2013 0.469 MAPKLFLSLLSFSLLTLSVAARPYVLVLSQEDFKDEVPADSDSSSAEWDEFGDSDSHKSEEDLDPGSWRQIFEPSSTDPQPQPQSDTEALYYSAVTKLMTGDARIIEEGSGEIETAAESGHPAAQSVLGFLCGIGLFRERNKQKAFVYHHFASEGGNMQSKMALAYLYTRQDMFDKSVKLYAELAEVAVNSFLISKDSPVIEPVRLHNGAEENKEALRKSKGEEDEDFQILEYQAQKGNAAAMYKVGLFYYFGLRGLRRDHSKALSWFLKAVDKGEPRSMELLGEIYARGAGVERNYTKAFEWLTLASKHHLYSAYNGIGYLYVKGYGVDSKNYTKAKEYFEKAADNEEVGGHYNLGVLYLKGIGVKRDVKLACKFFIVAANHGQPKAFYQLAKIFHLGVGFKKNVPLATALYKLVAERGPWSSLSRWALEAYLKGDIGKAYMLYSRMAEMGYEVAQSNAAWILDKYGERSMCMGESGFCTDAERHQRAHSLWWQASEQGNEHAALLIGDAYYYGRGTARDYDRAAEAYMHAKSQSNAQAMFNLGYMHEHGQGLPLDLHLAKRYYDEALEHDPAAKLPVTLALTSLWVRKNHADSLLVHIIDSLPDVYPKLEAWVENVLLEEGNATILTLFACLLTVLYLRERQRRQAVVVAGEAAEPNRPNELGVPAPI 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g05115 670 FunFam ERAD-associated E3 ubiquitin-protein ligase component HRD3A 205 316 - -
Mepo2g05115 670 PANTHER ERAD-ASSOCIATED E3 UBIQUITIN-PROTEIN LIGASE COMPONENT HRD3A-RELATED 4 652 IPR044623 GO:0030433
Mepo2g05115 670 SMART sel1 386 421 IPR006597 -
Mepo2g05115 670 SMART sel1 313 349 IPR006597 -
Mepo2g05115 670 SMART sel1 502 537 IPR006597 -
Mepo2g05115 670 SMART sel1 240 276 IPR006597 -
Mepo2g05115 670 SMART sel1 277 312 IPR006597 -
Mepo2g05115 670 SMART sel1 350 385 IPR006597 -
Mepo2g05115 670 SMART sel1 538 573 IPR006597 -
Mepo2g05115 670 SMART sel1 122 157 IPR006597 -
Mepo2g05115 670 Gene3D Tetratricopeptide repeat domain 103 197 IPR011990 GO:0005515
Mepo2g05115 670 Gene3D Tetratricopeptide repeat domain 212 594 IPR011990 GO:0005515
Mepo2g05115 670 MobiDBLite consensus disorder prediction 50 67 - -
Mepo2g05115 670 SUPERFAMILY HCP-like 114 187 - -
Mepo2g05115 670 MobiDBLite consensus disorder prediction 70 86 - -
Mepo2g05115 670 SUPERFAMILY HCP-like 433 574 - -
Mepo2g05115 670 SUPERFAMILY HCP-like 332 461 - -
Mepo2g05115 670 Pfam Sel1 repeat 122 157 IPR006597 -
Mepo2g05115 670 Pfam Sel1 repeat 504 526 IPR006597 -
Mepo2g05115 670 Pfam Sel1 repeat 538 572 IPR006597 -
Mepo2g05115 670 Pfam Sel1 repeat 435 453 IPR006597 -
Mepo2g05115 670 Pfam Sel1 repeat 240 275 IPR006597 -
Mepo2g05115 670 Pfam Sel1 repeat 278 310 IPR006597 -
Mepo2g05115 670 Pfam Sel1 repeat 353 384 IPR006597 -
Mepo2g05115 670 Pfam Sel1 repeat 314 347 IPR006597 -
Mepo2g05115 670 SUPERFAMILY HCP-like 221 330 - -
Mepo2g05115 670 MobiDBLite consensus disorder prediction 34 86 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g05115 K14026 - gmx:100787823 1147.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g05115 2 58987633 58994814 Mepo2g05115 2 58987633 58994814 ECH