Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g05097 ATGGATCATGATGCAATATTTGATGAAGAGTGTGATTACTTGTTCAAGGCAGTGCTGATTGGTGACTCTGGAGTTGGGAAATCAAATCTGCTTTCAAGGTTTGCAAAAGATGAATTCAGGTTGGATTCAAAACCAACTATAGGAGTTGAATTTGCTTACAGAAACATCAAGGTCAGAGACAAACTCATCAAAGCTCAAATATGGGACACTGCCGGCCAAGAAAGGTTTAGAGCTATCACAAGTTCGTATTATAGAGGAGCCTTGGGAGCATTGCTAGTGTATGACATAACGAGGCGATCAAGTTATGAGAGTGTAGGCAGATGGTTAGTGGAGCTAAGGGAGTTTGGTGGCGAAGAGATGGTAGTTATTCTAGTTGGAAACAAATGTGATCTTGGTGAATCAAGAGAAGTTGAGGAAGAAGAAGCAAAAGGGTTTGCAGAGGCAGAAGGGTTGTGTTTTATGGAAACCTCTGCTCTGAAGAATCTCAACGTTGAGCAAGTGTTCTTACAAATGATCACAACTATTTTTGACATCACAAACCAGAGAAGTTTGGATGCCAAAATGGATGAGACACCAATTAATCTATCCAATGGGAAAGAGATTCATATAGCTGATGAAGTCACCGCAACTAAACAGGCTCCTTGTTGTTCATGA 654 0.4067 MDHDAIFDEECDYLFKAVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRSSYESVGRWLVELREFGGEEMVVILVGNKCDLGESREVEEEEAKGFAEAEGLCFMETSALKNLNVEQVFLQMITTIFDITNQRSLDAKMDETPINLSNGKEIHIADEVTATKQAPCCS 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g05097 217 PRINTS Transforming protein P21 ras signature 38 54 - -
Mepo2g05097 217 PRINTS Transforming protein P21 ras signature 56 78 - -
Mepo2g05097 217 PRINTS Transforming protein P21 ras signature 15 36 - -
Mepo2g05097 217 PRINTS Transforming protein P21 ras signature 153 175 - -
Mepo2g05097 217 PRINTS Transforming protein P21 ras signature 118 131 - -
Mepo2g05097 217 SMART rho_sub_3 17 178 IPR001806 GO:0003924|GO:0005525
Mepo2g05097 217 ProSiteProfiles small GTPase Rho family profile. 8 175 - -
Mepo2g05097 217 CDD Rab11_like 12 176 - -
Mepo2g05097 217 NCBIfam small GTP-binding protein domain 14 168 IPR005225 GO:0005525
Mepo2g05097 217 Gene3D - 7 216 IPR027417 -
Mepo2g05097 217 SMART ran_sub_2 20 210 - -
Mepo2g05097 217 FunFam ras-related protein RABA5a 7 216 - -
Mepo2g05097 217 ProSiteProfiles small GTPase Ras family profile. 9 217 IPR001806 GO:0003924|GO:0005525
Mepo2g05097 217 SMART rab_sub_5 15 178 - -
Mepo2g05097 217 Pfam Ras family 16 175 IPR001806 GO:0003924|GO:0005525
Mepo2g05097 217 PANTHER DRAB11-RELATED 9 194 - -
Mepo2g05097 217 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 188 IPR027417 -
Mepo2g05097 217 SMART ras_sub_4 12 178 - -
Mepo2g05097 217 ProSiteProfiles small GTPase Rab1 family profile. 10 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g05097 Mepo-Chr2 58854954 58857705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g05097 16 179 EF-hand Containing Proteins AT5G27540 28.409 3.42e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g05097 K07976 - gmx:100784107 360.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g05097 2 58854954 58857705 Mepo2g05097 2 58854954 58857705 ECH