Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g05075 ATGGCTGAGGGTCTTGTTCTTCGCGGCACCATGCGTGCTCACACCGATGTCGTTACTGCCATAGCCACTCCAATTGACAACTCCGACATGATCGTCACTGCCTCCCGTGACAAATCCATCATCCTCTGGCATCTTACCAAGGAGGACAAGACCTATGGTGTACCCCGCCGCCGCCTCACAGGTCACTCTCATTTTGTTCAGGATGTTGTTCTTTCATCCGATGGTCAATTTGCTCTTTCTGGTTCATGGGACGGTGAGCTTCGTCTCTGGGATCTCAACGCTGGAACCTCCGCTCGCCGATTTGTCGGTCACACCAAAGATGTTCTCTCCGTCGCTTTCTCCATCGATAACCGTCAGATCGTGTCTGCTTCTCGTGACCGCACGATTAAGCTCTGGAACACTCTTGGTGAGTGCAAGTACACTATCCAAGATGGTGATGCTCATTCTGATTGGGTTAGCTGCGTCAGATTCAGCCCTAGCACTCTTCAGCCAACAATTGTCTCAGCCTCATGGGACAGGACTGTTAAGGTTTGGAATCTGACCAACTGTAAGCTGAGGAACACACTTGCTGGACATTCTGGTTATGTCAACACTGTTGCTGTTTCCCCTGATGGTTCTCTCTGTGCCTCTGGTGGGAAAGATGGAGTCATTTTGCTCTGGGATTTGGCTGAGGGAAAGAGACTTTACTCTCTTGATGCTGGTTCCATTATTCATGCTTTGTGTTTCAGTCCTAACAGGTACTGGCTCTGTGCTGCTACTGAGTCTAGCATTAAGATCTGGGACTTGGAGAGCAAGAGCATTGTTGAGGATTTGAAGGTTGATCTTAAGACTGAAGCTGATGCTGGCGGTGTTACCACCACCAAGAAGAAGGTTATCTACTGTACTAGTTTGAACTGGAGTGCCGATGGAAGCACCTTGTTTAGTGGATATACTGATGGTGTTGTTCGAGTTTGGGGAATCGGGCGTTACTAA 972 0.4897 MAEGLVLRGTMRAHTDVVTAIATPIDNSDMIVTASRDKSIILWHLTKEDKTYGVPRRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLNAGTSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQDGDAHSDWVSCVRFSPSTLQPTIVSASWDRTVKVWNLTNCKLRNTLAGHSGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGSIIHALCFSPNRYWLCAATESSIKIWDLESKSIVEDLKVDLKTEADAGGVTTTKKKVIYCTSLNWSADGSTLFSGYTDGVVRVWGIGRY 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g05075 323 SMART WD40_4 182 221 IPR001680 GO:0005515
Mepo2g05075 323 SMART WD40_4 4 44 IPR001680 GO:0005515
Mepo2g05075 323 SMART WD40_4 94 133 IPR001680 GO:0005515
Mepo2g05075 323 SMART WD40_4 224 261 IPR001680 GO:0005515
Mepo2g05075 323 SMART WD40_4 285 319 IPR001680 GO:0005515
Mepo2g05075 323 SMART WD40_4 52 91 IPR001680 GO:0005515
Mepo2g05075 323 SMART WD40_4 135 179 IPR001680 GO:0005515
Mepo2g05075 323 ProSitePatterns Trp-Asp (WD) repeats signature. 166 180 IPR019775 -
Mepo2g05075 323 Pfam WD domain, G-beta repeat 9 43 IPR001680 GO:0005515
Mepo2g05075 323 Pfam WD domain, G-beta repeat 146 179 IPR001680 GO:0005515
Mepo2g05075 323 Pfam WD domain, G-beta repeat 55 91 IPR001680 GO:0005515
Mepo2g05075 323 Pfam WD domain, G-beta repeat 295 318 IPR001680 GO:0005515
Mepo2g05075 323 Pfam WD domain, G-beta repeat 235 261 IPR001680 GO:0005515
Mepo2g05075 323 Pfam WD domain, G-beta repeat 187 221 IPR001680 GO:0005515
Mepo2g05075 323 Pfam WD domain, G-beta repeat 99 133 IPR001680 GO:0005515
Mepo2g05075 323 ProSitePatterns Trp-Asp (WD) repeats signature. 78 92 IPR019775 -
Mepo2g05075 323 Gene3D - 4 323 IPR015943 GO:0005515
Mepo2g05075 323 ProSiteProfiles Trp-Asp (WD) repeats profile. 189 230 IPR001680 GO:0005515
Mepo2g05075 323 ProSiteProfiles Trp-Asp (WD) repeats profile. 145 188 IPR001680 GO:0005515
Mepo2g05075 323 ProSitePatterns Trp-Asp (WD) repeats signature. 208 222 IPR019775 -
Mepo2g05075 323 ProSiteProfiles Trp-Asp (WD) repeats profile. 11 53 IPR001680 GO:0005515
Mepo2g05075 323 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 287 323 - -
Mepo2g05075 323 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 189 226 - -
Mepo2g05075 323 ProSiteProfiles Trp-Asp (WD) repeats profile. 59 100 IPR001680 GO:0005515
Mepo2g05075 323 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 11 45 - -
Mepo2g05075 323 CDD WD40 7 318 - -
Mepo2g05075 323 FunFam Receptor for activated C kinase 1 8 323 - -
Mepo2g05075 323 SUPERFAMILY WD40 repeat-like 5 318 IPR036322 GO:0005515
Mepo2g05075 323 PRINTS G protein beta WD-40 repeat signature 166 180 IPR020472 -
Mepo2g05075 323 PRINTS G protein beta WD-40 repeat signature 120 134 IPR020472 -
Mepo2g05075 323 PRINTS G protein beta WD-40 repeat signature 208 222 IPR020472 -
Mepo2g05075 323 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 59 95 - -
Mepo2g05075 323 ProSiteProfiles Trp-Asp (WD) repeats profile. 101 133 IPR001680 GO:0005515
Mepo2g05075 323 ProSiteProfiles Trp-Asp (WD) repeats profile. 295 323 IPR001680 GO:0005515
Mepo2g05075 323 PANTHER RECEPTOR FOR ACTIVATED PROTEIN KINASE C RACK1 3 320 IPR045223 GO:0043022|GO:0045182
Mepo2g05075 323 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 101 133 - -
Mepo2g05075 323 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 145 182 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g05075 140 320 Miscellaneous Gene Families AT5G08390 26.776 1.29e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g05075 K14753 - gmx:100778205 636.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g05075 2 58665336 58668225 Mepo2g05075 2 58665336 58668225 ECH