Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g05065 ATGCCGTTTCCGATGATGCGAATTCGAATGCGGATTCCCTCCGCCGGCATCTTCAGACTCGCCGCTCGTCATTTCCTCACCACCACAACAGCAACCACTAACATCCGCATTCGTCTTTCATCTTCCTCACCCGCCGCCCTAAACCACCATAGACACAGAACCTTCGCTCTTCCGCTTTTTCACCAACAAACCTCCACTTACGGCCGTTTTGCATTCGAAGACGTTTCCTCTGATGAATCCGACCTCGAATTCGCTTCTTCTCGCCCTCAACAACGTCAACAACAACAACAACAATTGGGGGATTCGACTCTTGAAAACATTGATTCTTGGAGATGGAAACTCACCATGCTTCTTCGCAAAAAAGATCAGCAAGAAGTTGTGTCCAATGAGAAAAAAGACCGTCGTGATTTTCTGCAACTTGAAACTTTAGCCACCAGGATGGGCTTATACAGTCGACAATATGCAAGAGTTGTTGTCTTTAGCAAGGTGCCTTTGCCAAATTATCGCCCTGACCTCGATGATAAGCGTCCACTGAGAGAGGTAACCTTACCATTTGGTGTTCATAGAGAAGTAGACACTCATCTCCTTGCTCATCTTTCACATAAGGCTACAAAAAGAGTAGGCTCTTTCGATGATTCCTTGCATAGATCAAGAGATGATGGAAGCATTCCTGCGGATGAAGGGATTTATGGGCATCTGGAGCCCATGAGCCATAATAGTGTTGCCAAAGAGAAAATCCTTCAACGAAGAAGTTTACAACTGCATCATCAACAACAAGACTGGCAGGAATCTCCCGAAGGCCAAAAGATGCTTGAATTTCGCCGAAGTCTTCCTGCATTCAAAGAGAAAGATGCATTTTTGAAAGTCGTTTCAGAGAATCAGGTCATTGTCGTCTCAGGTGAAACTGGTTGTGGTAAGACCACACAACTTCCTCAATACATATTAGAATCTGAGATTGAAGCTGCACGTGGAGCTCTATGTAACATAATTTGTACTCAGCCTAGAAGAATATCTGCTATATCTGTTTCTGAAAGAGTTGCAGCAGAACGTGGGGAAAAATTGGGAGAATCTGTTGGTTATAAAGTTCGGTTGGAGGGTATGAGAGGGAGGGATACTCGTCTTCTTTTTTGCACCACAGGTGTGTTATTGCGGAGACTACTTGTGGATAGAAGTTTAAAAGGTGTAACCCATGTTATTGTTGATGAAATTCATGAACGTGGAATGAATGAAGATTTTCTTCTCATTGTCCTGAAGGATCTCCTACCTCGTCGTCCTGATTTGAGATTAATTTTGATGAGTGCAACCTTAAATGCTGAGCTTTTTTCTTCATATTTTGATGGTGCCCCAACCATGCATATCCCTGGGTTCACCTTTCCAGTTCGAGCACAATTTCTTGAGGATATTCTGGAAAGGACTGGGTATCGTTTGACTCCTTATAATCAAATTGATGACTATGGTCAAGAAAAAACATGGAAAATGCAGAAACAAGCCCAGTCTTTCAAAAAAAGAAAGAGCCAGATTGCTTCTGCTGTTGAGGATGCATTAGAGGTTGCAGACTTTAAGGGGTATAGCCTACGCACTAAGGAGTCAATGTCCTGCTGGAACCCTGACTCAATTGGTTTCAACCTTATTGAACATGTGCTTTGCCACATTGTTAAGAATGAAAGGCCAGGTGCTGTTTTGGTTTTTATGACTGGTTGGGATGATATAAACTCTTTGAAGGATAAACTCCACGCTCATCCTTTGTTGGGTGATCAGAGCCGAGTATTACTTCTTGCGTGCCATGGCTCTATGTCCAGCTCAGAGCAGAAATTAATTTTTGAAAATCCTGGAGGAGGGGTGAGGAAGATTGTTCTGGCTACTAATATGGCAGAGACTAGTATTACCATCAATGACGTTGTATTTGTGGTTGATTGTGGAAAAGCAAAGGAGACATCATATGATGCATTAAATAACACTCCTTGTTTGCTTCCATCTTGGATCTCAAAAGCTGCTGCCAGACAGAGAAAAGGAAGGGCAGGTCGTGTTCAATCTGGCGAATGCTACCATCTTTATCCCAGATGTGTTTATGATGCTTTTGCTGATTATCAATTGCCAGAGCTTTTAAGAACACCTTTACAGTCCTTATGTCTACAAATAAAAAGTCTACAACTTGGAAGCATCTCTGAGTTTTTATCTAGTGCTCTCCAGCCACCAGAGCCTCTGTCGGTTCAAAATGCTGTTGATTATTTGAAAATTATCGGTGCTTTAGACGAGAATGAAAATTTGACAGTTCTAGGGCGCAAGTTGTCAATGCTTCCGGTAGAGCCTAAGCTTGGCAAGATGCTCATCTTGGGAGCTATTTTCAACTGTTTGGATCCCATATTGACTGTTGTTGCTGGACTTAGTGTGAGAGATCCATTTGTTGTGCCGGCTGACAAGAAGGATCTTGCAGAGTCGGCCAAGGCCCAGATTGCTGCTCGTGGATACAGTGATCATCTTGCACTTGTTCGTGCTTATGATGGTTGGAAAGATGCTGAAGCACAGCAAGCTGGTTACGAGTTCTGTTGGCGTAATTTTCTCTCTAGTCAAACTCTTAGGGCTATTGACTCTCTCCGAAAGCAATTCTTTCACTTGCTCAAAGATATTGGTCTGGTTGGCAACAATTCTGAAACCAACAATAAATGGAGTAATGAGGAGCATCTGCTCCGAGCAGTTATCTGTGCGGGTTTGTTTCCTGGAATATCCTCTGTTGTGAACAAGGAAAAGTCAATATCACTGAAAACAATGGAGGATGGTCAGGTTCTTCTGTATGCTAACTCGGTAAATGGAAGTGTAGCCAAAATTCCATACCCATGGATAGTGTTTAATGAAAAGATTAAAGTCAATACAGTATTCCTTAGGGATTCAACTGGCATATCTGATTCCATGCTGCTCTTATTTGGCGGGAACATATCCAAAGGTGGACTGGATGGTCACCTAAAAATGTTGGGAGGGTATCTAGAATTTTTCATGAAACCAGAATTAGCCAAGACGTACTCAACTTTGAAGAGGGAACTGGAAGAATTGATACATAAAAAACTTCTGGATCCTATGTTCGATATACACTCGCATAATGAGCTTCTTTCAGCTGTTAGATTGTTGGTATCGGAGGACCACTGCGACGGAAGATTTGTCTATGGTCACCAGGTCCTACCACAGTTGAAGAAGGAAACGAAATCCAAAAGCGGTGATGGAGCTGGGGGTGATAATTCTAAAAATCAGCTTCAAACATTCCTCAGCAGGGCTGGACATCAGTTACCAACTTACAAAACACAGGAGCTGAGAAACAACCAATTCCGTTCTACTGTCATATTCAACGGCTTGGATTTTGTTGGGAAGCCATGCAACAGCAAGAAACTAGCAGAAAAATCTGCTGCTGCTGAGGCTATTCTATGGTTAAAAGGGGATAATACCCATTCATCTGGTGATATTGATCATGCATCTGTGCTTTTGAAGAAAAGCAACAAGAAAAGTAAAAAAAAATCGTTTAGTGATGCTAAATGGAGTTGA 3531 0.4242 MPFPMMRIRMRIPSAGIFRLAARHFLTTTTATTNIRIRLSSSSPAALNHHRHRTFALPLFHQQTSTYGRFAFEDVSSDESDLEFASSRPQQRQQQQQQLGDSTLENIDSWRWKLTMLLRKKDQQEVVSNEKKDRRDFLQLETLATRMGLYSRQYARVVVFSKVPLPNYRPDLDDKRPLREVTLPFGVHREVDTHLLAHLSHKATKRVGSFDDSLHRSRDDGSIPADEGIYGHLEPMSHNSVAKEKILQRRSLQLHHQQQDWQESPEGQKMLEFRRSLPAFKEKDAFLKVVSENQVIVVSGETGCGKTTQLPQYILESEIEAARGALCNIICTQPRRISAISVSERVAAERGEKLGESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLKGVTHVIVDEIHERGMNEDFLLIVLKDLLPRRPDLRLILMSATLNAELFSSYFDGAPTMHIPGFTFPVRAQFLEDILERTGYRLTPYNQIDDYGQEKTWKMQKQAQSFKKRKSQIASAVEDALEVADFKGYSLRTKESMSCWNPDSIGFNLIEHVLCHIVKNERPGAVLVFMTGWDDINSLKDKLHAHPLLGDQSRVLLLACHGSMSSSEQKLIFENPGGGVRKIVLATNMAETSITINDVVFVVDCGKAKETSYDALNNTPCLLPSWISKAAARQRKGRAGRVQSGECYHLYPRCVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLSSALQPPEPLSVQNAVDYLKIIGALDENENLTVLGRKLSMLPVEPKLGKMLILGAIFNCLDPILTVVAGLSVRDPFVVPADKKDLAESAKAQIAARGYSDHLALVRAYDGWKDAEAQQAGYEFCWRNFLSSQTLRAIDSLRKQFFHLLKDIGLVGNNSETNNKWSNEEHLLRAVICAGLFPGISSVVNKEKSISLKTMEDGQVLLYANSVNGSVAKIPYPWIVFNEKIKVNTVFLRDSTGISDSMLLLFGGNISKGGLDGHLKMLGGYLEFFMKPELAKTYSTLKRELEELIHKKLLDPMFDIHSHNELLSAVRLLVSEDHCDGRFVYGHQVLPQLKKETKSKSGDGAGGDNSKNQLQTFLSRAGHQLPTYKTQELRNNQFRSTVIFNGLDFVGKPCNSKKLAEKSAAAEAILWLKGDNTHSSGDIDHASVLLKKSNKKSKKKSFSDAKWS 1176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g05065 1176 Pfam DEAD/DEAH box helicase 288 438 IPR011545 GO:0003676|GO:0005524
Mepo2g05065 1176 Gene3D - 719 822 - -
Mepo2g05065 1176 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 543 717 IPR001650 -
Mepo2g05065 1176 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 280 875 IPR027417 -
Mepo2g05065 1176 CDD SF2_C_RHA 531 685 - -
Mepo2g05065 1176 SMART DRBM_3 1078 1141 IPR014720 -
Mepo2g05065 1176 Pfam Double-stranded RNA binding motif 1078 1140 IPR014720 -
Mepo2g05065 1176 SMART ha2_5 739 830 IPR007502 GO:0004386
Mepo2g05065 1176 Gene3D - 1060 1145 - -
Mepo2g05065 1176 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 287 454 IPR014001 -
Mepo2g05065 1176 Pfam Helicase conserved C-terminal domain 545 676 IPR001650 -
Mepo2g05065 1176 CDD DEXHc_RHA-like 293 453 - -
Mepo2g05065 1176 Pfam Helicase associated domain (HA2) 740 814 IPR007502 GO:0004386
Mepo2g05065 1176 SUPERFAMILY dsRNA-binding domain-like 1065 1141 - -
Mepo2g05065 1176 Gene3D - 537 695 IPR027417 -
Mepo2g05065 1176 FunFam Putative ATP-dependent RNA helicase DHX36 719 823 - -
Mepo2g05065 1176 PANTHER ATP-DEPENDENT RNA HELICASE 225 1014 - -
Mepo2g05065 1176 Gene3D - 230 455 IPR027417 -
Mepo2g05065 1176 MobiDBLite consensus disorder prediction 1144 1176 - -
Mepo2g05065 1176 FunFam DExH-box ATP-dependent RNA helicase DExH3 539 695 - -
Mepo2g05065 1176 Pfam Oligonucleotide/oligosaccharide-binding (OB)-fold 896 978 IPR011709 -
Mepo2g05065 1176 FunFam DExH-box ATP-dependent RNA helicase DExH3 232 455 - -
Mepo2g05065 1176 SMART ultradead3 275 471 IPR014001 -
Mepo2g05065 1176 SMART helicmild6 571 677 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g05065 Mepo-Chr2 58572339 58584501 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g05065 K14442 - gmx:100791006 1882.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g05065 2 58572339 58584501 Mepo2g05065 2 58572339 58584501 ECH