Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g05060 ATGGGGAGCACTGGGTTAAGCAACCGCGATATCGGGCAGCGCCAAAGGTTAGGGATAACCGAGCCGATCTCATTGAGCGGACCAACTGAATATGATGTCGCCAAGACGTGTGAGCTCGAGAAGTACTTGCAAGACGCCGGCTTGTATGAGAATCAGGACGAAACAATTTGTAGGGAGGAAGTGCTTGGCAGGCTAGACCAGATTGTGAAGATTTGGGTCAAAACCATTTGCCGTGCAAAGGGATTTAACGAACAACTGGTCAAAGAAGCAAATGCCATGATTTTTACTTTTGGATCCTATCGCCTAGGGGTGCATGGCCCTGGAGCAGATATTGACGTTCTTTGCGTGGGACCTAGACATGCAACCAGAAAGGAAGATTTCTTTGGTGAGCTGCATAAAATGCTATCTGAAATGCCTGAAGTGACAGAGCTGCACCCAGTGCCTGATGCTCATGTTCCAGTGATGAGTTTCAAGTTCAACGACGTCTCTTTGGATCTCCTTTATGCACAATTGTCTTTGTGGGTTATTCCTGAAGACTTGGATTTATCACAGGAAGCAATATTACAAAATACAGACGAACAAACTGTTCGCAGTCTTAATGGTTGTCGAGTGACTGATCAAATCTTGCATTTGGTTCCAAATATTCAGAATTTTCGTACGACATTGAGATGCGTGAAGTTATGGGCTAAGCGCCGTGGTGTTTATTCAAATGTTGCAGGTTTTCTTGGTGGTATAAACTGGGCATTGCTTGTTGGTCGAATATGCCAGCTATATCCAAATGCACTGCCTAATATGTTGGTGTCTCGATTCTTTAGGGTATACACTCAGTGGCGTTGGCCAAACCCAGTAATGCTTTGTGCTATTAGGGAAGGATCTCTTGGACTTCAAGTTTGGGATCCTAGAAGAAATCCCAAGGATAAATACCATCTAATGCCAATAATTACTCCTGCTTATCCGTGCATGAATTCTAGCTACAATGTGTCATTAAGTACATTGCGTGTTATGACAGAGGAATTTCAGAGGGGAGATGAAATATGTGAGGCTATGGAGGCTAACAAGGCTGATTGGGATACTCTTTTTGAGCCCTATCCATTTTTTGAAGCTTATAAGAATTATTTGCGGATAGACATTTCATCAGAGAATGTTGATGATCTTAGAAACTGGAAAGGTTGGGTTAAGTCTCGCTTGCGCCAGTTGACATTGAAGCTTGAGAGGAACACTTATGGCATGCTTCAGTGTCATCCACATCCTGGTGATTTTTCAGACAAATCTAGACCTCTACACTGTTCTTACTTCATGGGTCTGCAACGTAAGCAAGGAGTTCCTGCCAATGAAGGCGGACAATTTGATATAAGATTAACTGTTGAAGAATTTAAGCATTCTGTCAATGCGTACGCGCAATGGAAACCTGGAATGAATATATCCATCTCCCATGTGAAACGCCGCAATATACCCGCCTTTGTATTTCCTGGTGGTGTTCGGCCTAACTGCCCATCTAAAGTAACCTGGGTAAGTAAGCAACGATCAGAGCTTAGGGTTTCCGGCCATGGTCAAGCAGAAAAGTCTCAAGAGGGTAAAGAGTTAGGAGCAAACAATGATAGGAAGAGAAAGCAAGCAGAAGATAGTGGGGATGCCTTGAGAAACTCCCGGTCCTTTTCCTCTCTGCCTCCCTTTAGCAGGGATGTTCATGAAGATGGAAATCATGTCAGCATCGCTAGTTCTTGTTCTGTGAAATGTGATGACACAGAACTCAACTGTATGAGTGAACAAAAGAGCGAGAAACCTGATTTGAATTTTTCAGGGGAGCGTCCTTCTGGGGCTAGAGAGACCAGTGGATCAGTGAAAAGCAACTCACAAATGATCCCTTTACTTGCTGCTACTGATAGGTCTAATTTTAAAGAAGCTGAAAAGGTCGTCAACCAGAAGATTGTGTGTGGTCCATGTGAGGTACATCAAGCCTCTCCAGAAGAACCTGATGAGCTTGAAGATGATCTTGAGTATAGAAATAAAGTCAAAGACTTTGGTGAGAACATGGAAAACATCAATTTGGACTCTACAAAGTCTGTAGTTGCAGCAGAACCTGTTTTTTCTCAAAAGGAAAATAGTAGTTCAACTCATATATACTCTAACGAGGGCTTGGAGGAGCTTGAGGTTAACATCTTAATATATATCTTACATTTGGAAATTTTCAATCATTTTGCAACAATAATATTATAA 2217 0.4253 MGSTGLSNRDIGQRQRLGITEPISLSGPTEYDVAKTCELEKYLQDAGLYENQDETICREEVLGRLDQIVKIWVKTICRAKGFNEQLVKEANAMIFTFGSYRLGVHGPGADIDVLCVGPRHATRKEDFFGELHKMLSEMPEVTELHPVPDAHVPVMSFKFNDVSLDLLYAQLSLWVIPEDLDLSQEAILQNTDEQTVRSLNGCRVTDQILHLVPNIQNFRTTLRCVKLWAKRRGVYSNVAGFLGGINWALLVGRICQLYPNALPNMLVSRFFRVYTQWRWPNPVMLCAIREGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSLSTLRVMTEEFQRGDEICEAMEANKADWDTLFEPYPFFEAYKNYLRIDISSENVDDLRNWKGWVKSRLRQLTLKLERNTYGMLQCHPHPGDFSDKSRPLHCSYFMGLQRKQGVPANEGGQFDIRLTVEEFKHSVNAYAQWKPGMNISISHVKRRNIPAFVFPGGVRPNCPSKVTWVSKQRSELRVSGHGQAEKSQEGKELGANNDRKRKQAEDSGDALRNSRSFSSLPPFSRDVHEDGNHVSIASSCSVKCDDTELNCMSEQKSEKPDLNFSGERPSGARETSGSVKSNSQMIPLLAATDRSNFKEAEKVVNQKIVCGPCEVHQASPEEPDELEDDLEYRNKVKDFGENMENINLDSTKSVVAAEPVFSQKENSSSTHIYSNEGLEELEVNILIYILHLEIFNHFATIIL 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g05060 738 FunFam Nuclear poly(A) polymerase 4 364 479 - -
Mepo2g05060 738 Pfam Poly(A) polymerase predicted RNA binding domain 427 495 IPR007010 GO:0003723|GO:0043631
Mepo2g05060 738 Pfam Poly(A) polymerase predicted RNA binding domain 365 423 IPR007010 GO:0003723|GO:0043631
Mepo2g05060 738 MobiDBLite consensus disorder prediction 509 565 - -
Mepo2g05060 738 PANTHER POLY A POLYMERASE 13 542 - -
Mepo2g05060 738 Pfam Nucleotidyltransferase domain 76 157 IPR002934 GO:0016779
Mepo2g05060 738 SUPERFAMILY PAP/OAS1 substrate-binding domain 213 362 - -
Mepo2g05060 738 Pfam Poly(A) polymerase central domain 18 362 IPR007012 GO:0043631|GO:1990817
Mepo2g05060 738 Gene3D Beta Polymerase, domain 2 50 206 IPR043519 -
Mepo2g05060 738 FunFam Poly(A) polymerase alpha, putative 50 206 - -
Mepo2g05060 738 SUPERFAMILY PAP/Archaeal CCA-adding enzyme, C-terminal domain 363 489 IPR011068 GO:0003723|GO:0016779|GO:0031123
Mepo2g05060 738 SUPERFAMILY Nucleotidyltransferase 18 210 IPR043519 -
Mepo2g05060 738 CDD NT_PAP_TUTase 58 212 - -
Mepo2g05060 738 Gene3D - 18 360 - -
Mepo2g05060 738 FunFam Putative poly(A) polymerase gamma 177 360 - -
Mepo2g05060 738 Gene3D Poly(A) polymerase predicted RNA binding domain 364 479 - -
Mepo2g05060 738 MobiDBLite consensus disorder prediction 513 544 - -
Mepo2g05060 738 MobiDBLite consensus disorder prediction 588 616 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g05060 Mepo-Chr2 58539639 58546120 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g05060 K14376 - gmx:100816915 1071.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g05060 2 58539639 58546120 Mepo2g05060 2 58539639 58546120 ECH