Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04944 ATGATGACGTGTTCTTCGGATACGATCAACATCGCTGCGAGAACTCAGAAAGTCGATGTTGATAATCGATTTTCGCTTCGTATCTACTACAGGATCGCCGATAATATCCTCAAACAGGCTGATATTTTCCGTGCAGAGAAAAATATTATTGATCTATATATCATGCTCCTAAGATATTCCAGTTTGGTCTCTGAGACAATACCACGGCACCGAGATTATAGAACATCTCCACAGAGCAAGAAAGAATTATTGAGAAAGAAATTGTTAACTTCTGTGATTGAACTGGAGAAGTTGAAACCACTGGCACAACAGAAGATCAATGAGCTTAACAGCAGGAAATCATATCAACAGAGTGGGAGGGACGCGTTTCGTTCAAATTATTCGACTGGTTTTTCCCCAGTGAAAAAGCAAACTATGGCTAGTTACGATCAAATAAAGGCTCTCAGACAAACTGCAGGAGAGTTTGTCCACCGAGGATCAAAGGCCCAGCAGTATCCTTATGCAAGGCCTATGGAAGATAGTATGAAAAGACTATCTCTAACTCTCCCACCCCCAAAGGAAGAAACCCTCTCCAGACATTCTATTCTAGGTCCAAATGGCCTTAAAGGGCCGTGGCAACCACCTACAAGCGATAAAGGGGTGAGGTATCCAACTATCATAGATCTGTCTCCAGTTGAAATTCCAAGCCTTCATCAATCCTTGGAAGATGGATCACAAAATAAAAAAGATAATAGCATTTCAGAACACAATAAATCAGACGTAGAATCTACTCTTACCCAGAGTGAGGACTGCCAGGTCAAACATGCTGATGAAACTCCTTCGCTTATCTCATTTGAAGAAACAGAAGACTCTGCTCCTATAAAAGTTATCAGACAGCCTTCTCCTCCACCTGTACTTGCAGAAGTACAAGATTTGGTTCCTACAGTATCACCTCATGTTGATGAGGCAGGATGTAAGACAGAGACTCCATCATCAGATAGTTTTGGCCGTGCTGAGTCTCCTCTTCAATTGCACATCTCAACTGCAATGATGGGGAGTTTTATGAAGCTTGCTAAGTCTAACACTGACAAAAATTTAGAGACTTGTGGTATCCTTGCAGGCTCGCTTAAAAATAGAAAATTTTATATCACAGCTCTAATAATCCCTAAGCAGGAGGCAACATCAAGTTCTTGTCAAGCCACAAATGAAGAGGAAATATTTGAAGCACAAGATAAGCGATCACTTTTTCCCCTTGGATGGATCCATACACACCCTACACAATCTTGTTTCATGTCATCAATTGATGTACACACCCATTACTCATATCAGATTATGCTGCCAGAAGCTGTTGCAATAGTCATGGCACCAACAGACAGTTCAAGAACTCATGGTATTTTTCGGTTGACAACCCCTGGTGGCATGTCGGTCATTAGACAATGCCAGCAACGAGGCTTTCATCCACATGATCCGCCTCCAGATGGTGGTCCTATTTACGATACATGTACAGATGTTTACTTGAACCCCGATTTAAAATTTGATGTCATTGATCTTCGATGA 1536 0.4154 MMTCSSDTINIAARTQKVDVDNRFSLRIYYRIADNILKQADIFRAEKNIIDLYIMLLRYSSLVSETIPRHRDYRTSPQSKKELLRKKLLTSVIELEKLKPLAQQKINELNSRKSYQQSGRDAFRSNYSTGFSPVKKQTMASYDQIKALRQTAGEFVHRGSKAQQYPYARPMEDSMKRLSLTLPPPKEETLSRHSILGPNGLKGPWQPPTSDKGVRYPTIIDLSPVEIPSLHQSLEDGSQNKKDNSISEHNKSDVESTLTQSEDCQVKHADETPSLISFEETEDSAPIKVIRQPSPPPVLAEVQDLVPTVSPHVDEAGCKTETPSSDSFGRAESPLQLHISTAMMGSFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQEATSSSCQATNEEEIFEAQDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPEAVAIVMAPTDSSRTHGIFRLTTPGGMSVIRQCQQRGFHPHDPPPDGGPIYDTCTDVYLNPDLKFDVIDLR 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04944 511 CDD MPN_AMSH_like 336 511 IPR044098 GO:0016579|GO:0061578|GO:0070536|GO:0140492
Mepo2g04944 511 MobiDBLite consensus disorder prediction 234 265 - -
Mepo2g04944 511 SUPERFAMILY USP8 N-terminal domain-like 23 121 - -
Mepo2g04944 511 Coils Coil 92 112 - -
Mepo2g04944 511 SUPERFAMILY JAB1/MPN domain 336 467 - -
Mepo2g04944 511 SMART pad1_6 336 464 IPR000555 GO:0005515|GO:0008233|GO:0008237
Mepo2g04944 511 Gene3D - 1 128 - -
Mepo2g04944 511 MobiDBLite consensus disorder prediction 236 250 - -
Mepo2g04944 511 PANTHER AMSH-LIKE PROTEASE 5 511 - -
Mepo2g04944 511 FunFam AMSH-like ubiquitin thioesterase 3 322 511 - -
Mepo2g04944 511 FunFam AMSH-like ubiquitin thioesterase 3 5 121 - -
Mepo2g04944 511 ProSiteProfiles MPN domain profile. 337 467 IPR037518 -
Mepo2g04944 511 MobiDBLite consensus disorder prediction 181 216 - -
Mepo2g04944 511 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 334 440 IPR000555 GO:0005515|GO:0008233|GO:0008237
Mepo2g04944 511 Gene3D Cytidine Deaminase, domain 2 319 511 - -
Mepo2g04944 511 Pfam USP8 dimerisation domain 11 99 IPR015063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04944 Mepo-Chr2 57572027 57578726 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04944 K11866 - gmx:100800636 815.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04944 2 57572027 57578726 Mepo2g04944 2 57572027 57578726 ECH