Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04770 ATGGAATTCGAAGTTGCTGAGGATCAATTCTATGATACAAGGGAAGATTTGTGTTCTGTTTCTGATGATGGTTTAGATTATTGTTTAGAATCTTGTTCTGGTGGTAATATTAATAATTATGAATATGTTACTAGATTCAATGTTTGGATTAATAACCTTGATAGTGTTCACCATAGAAGATTCAATTTTTTAAGATGGATGGGTTTGGAGTATGATAGGAATTCAGTTGAGGGAGATGAGTATGGAGATGATCCATCCTGTGGAGTTGACCGAATAAGCCAGACTATGTTCAGAACTGTAGAGGGTTTTCCCTCAACCTCAAACCAGATTGTGTCGGATTCTTTGTCAAACGAGGCTTCTAGGTTGTTAGAAAATCCCGATGATGGTACGGAGAATTTGACATGTATGATAAAGAATTTGGATGATGGAACAGAATATGTTGTAGATAAATTGGATCAAGAGGGAAAACTTAGTACTCTGCGCGTTCTCGGTTCGAACCAGTTGATTAGTTTTGAAGAGTTTCATAAAAATATTGGGCCGTCGTCGTTTGTTCGCAGACATTTGCAGAGAGAAGCTGAAAGTACTAGATTGTTGAGTGTTGCCAAAAAGAAGATGAAGAAAGGTTGGTTAAGCAAACTGGATTCTATTGCTTGTTTTTATCATAATCAAGGGTTTGATGAAACTTGCTGCAACAAAGACTTTGATTCTAGGATACATAGAGTTCGTGTTCATCCGCATAAGAAGCGAGTTAAGGAGCTTTCATCTCTTTACACTGAACAGGAGTTTAAAGCACACAAAGGCGTTATTTTGACGATGAAGTTTAGTCTTGATGGAAAATATTTGGCTAGTGGTGGTGAAGACGGCATTGTGCGTGTGTGGCAGGTGGTTGAGAATGAAAGATCAAATGAATTGAACATTCTGGACAATGATCCATCAAATATATATTTCAAAATGAATCAGTTTACTGGTTGTGTGGCTCCCCTTGATGTAGATAAAGATAAATTAGTTAAAACGGAGAAGTTGAGGAAATCATCTGCTTCAACTTGTGTAATTATCCCACCAAAGACCTTCCGCATATTGGTGAAACCTTTGCATGAATTCCAGGGGCATAGTGATGACATTATAGACCTTGCATGGTCTAAATCAGGGTTTCTACTGTCATCCTCCGTTGATAAGACTGTGCGCCTATGGCAAGTAGGGATTAGCAAATGTCTTCGAGTTTTCTCTCACAATAATTATGTAACATGTGTGAATTTCAATCCCGTCAATGATAATTTTTTCATCAGTGGTTCAATTGATGGGAAGGTGCGCATCTGGGAAGTTGTTCGCTGTCGTGTTGTTGATTACATTGATATCAGAGAGATAGTCACAGCTGTATGCTTCTGCCCTAATGGAAAGGGCACAATTGTGGGTACCATGGCGGGCAATTGCCGTTTCTATAATATCCTAGATAATCATATGAAAATGGATGCCGAATTTTCGTTACAAGGCAAAAAGAAGACATCGGGGAAAAGGATCACTGGCTTTCAGTTTTCGCCCAGTGATCCGACCAAATTATTGGTTGCTTCTGCCGATTCACATGTCTGTATACTCTCTGGAATTGATGTCATCTACAAATTCAAGGGTCTGAGAAGTGCGGGTCAGATGCATGCTTCCTTCACCTCTGACGGGAAACATATCGTTTCACTTAGTGAAGGTTCAAATGTTTGTATCTGGAATCACACTGGCCAGGATAGGAATACTTCCAAAGCAAAGAAGATTATGTCTTCTGAGAGTTTTCTATCCCACAATGCAACAGTCGCCATACCTTGGTGTGGCATTGAGTCAACGCCGTTGTCTCCTTCACTCGGAGAAGAGTTGATTCAGAGGTCATCTTCTTCTTCTCCTGATTGTTTCTTCATGAGTCGTGGATTTCTTTCCGAGTTAGTGCCAAAGGTTTCTGCAACATGGCCAGAGGAGACGCTTCTCGACTCGGGTCAAACTGTTGTTTCTCCTACAATATGTAAATCAGAGTATAGGTTCTTGAGAAGTGCTTGCAAGGGAATGTCTAATTCTCACTTGTGGGGCCAAGTAATTGTAACAGCAGGATCTGATGGATTCATAAGAGTGTACCAAAATTACGGCTTACCCGTTCGTGTTTGA 2142 0.4006 MEFEVAEDQFYDTREDLCSVSDDGLDYCLESCSGGNINNYEYVTRFNVWINNLDSVHHRRFNFLRWMGLEYDRNSVEGDEYGDDPSCGVDRISQTMFRTVEGFPSTSNQIVSDSLSNEASRLLENPDDGTENLTCMIKNLDDGTEYVVDKLDQEGKLSTLRVLGSNQLISFEEFHKNIGPSSFVRRHLQREAESTRLLSVAKKKMKKGWLSKLDSIACFYHNQGFDETCCNKDFDSRIHRVRVHPHKKRVKELSSLYTEQEFKAHKGVILTMKFSLDGKYLASGGEDGIVRVWQVVENERSNELNILDNDPSNIYFKMNQFTGCVAPLDVDKDKLVKTEKLRKSSASTCVIIPPKTFRILVKPLHEFQGHSDDIIDLAWSKSGFLLSSSVDKTVRLWQVGISKCLRVFSHNNYVTCVNFNPVNDNFFISGSIDGKVRIWEVVRCRVVDYIDIREIVTAVCFCPNGKGTIVGTMAGNCRFYNILDNHMKMDAEFSLQGKKKTSGKRITGFQFSPSDPTKLLVASADSHVCILSGIDVIYKFKGLRSAGQMHASFTSDGKHIVSLSEGSNVCIWNHTGQDRNTSKAKKIMSSESFLSHNATVAIPWCGIESTPLSPSLGEELIQRSSSSSPDCFFMSRGFLSELVPKVSATWPEETLLDSGQTVVSPTICKSEYRFLRSACKGMSNSHLWGQVIVTAGSDGFIRVYQNYGLPVRV 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04770 713 ProSiteProfiles Trp-Asp (WD) repeats profile. 262 303 IPR001680 GO:0005515
Mepo2g04770 713 PANTHER WD REPEAT DOMAIN 44 6 710 IPR040324 -
Mepo2g04770 713 Pfam WD domain, G-beta repeat 403 439 IPR001680 GO:0005515
Mepo2g04770 713 Pfam WD domain, G-beta repeat 362 397 IPR001680 GO:0005515
Mepo2g04770 713 Pfam WD domain, G-beta repeat 260 293 IPR001680 GO:0005515
Mepo2g04770 713 PRINTS G protein beta WD-40 repeat signature 385 399 IPR020472 -
Mepo2g04770 713 PRINTS G protein beta WD-40 repeat signature 427 441 IPR020472 -
Mepo2g04770 713 PRINTS G protein beta WD-40 repeat signature 281 295 IPR020472 -
Mepo2g04770 713 ProSiteProfiles Trp-Asp (WD) repeats profile. 367 407 IPR001680 GO:0005515
Mepo2g04770 713 Gene3D - 187 315 IPR015943 GO:0005515
Mepo2g04770 713 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 407 441 - -
Mepo2g04770 713 Gene3D - 452 711 IPR015943 GO:0005515
Mepo2g04770 713 ProSiteProfiles Trp-Asp (WD) repeats profile. 407 441 IPR001680 GO:0005515
Mepo2g04770 713 FunFam WD repeat-containing protein 44 isoform A 249 494 - -
Mepo2g04770 713 Gene3D - 332 451 IPR015943 GO:0005515
Mepo2g04770 713 SMART WD40_4 255 294 IPR001680 GO:0005515
Mepo2g04770 713 SMART WD40_4 665 705 IPR001680 GO:0005515
Mepo2g04770 713 SMART WD40_4 360 398 IPR001680 GO:0005515
Mepo2g04770 713 SMART WD40_4 488 532 IPR001680 GO:0005515
Mepo2g04770 713 SMART WD40_4 443 481 IPR001680 GO:0005515
Mepo2g04770 713 SMART WD40_4 401 440 IPR001680 GO:0005515
Mepo2g04770 713 SMART WD40_4 533 573 IPR001680 GO:0005515
Mepo2g04770 713 SUPERFAMILY WD40 repeat-like 256 704 IPR036322 GO:0005515
Mepo2g04770 713 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 367 399 - -
Mepo2g04770 713 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 262 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04770 Mepo-Chr2 55945773 55950410 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04770 339 578 Miscellaneous Gene Families AT5G08390 25.188 1.95e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04770 - - gmx:100788374 1116.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04770 2 55945773 55950410 Mepo2g04770 2 55945773 55950410 ECH