Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04769 ATGCTTGAAACGGTTAAATACCTAATCGGATCGGCGGGTCCAAGCGGTTTTGGATCCAAATCCACCGCCGAACAAGTCACTCAAACCTGCGGCGATCTCCGTTCCATCACCGCCATCATAACAGGTGGTACGTCAGGAATCGGAGCGGAAACGGCGCGTGTGTTGGCTAAGAGAGGTGCGAGGGTGATTTTACCGGCGCGTAGCATGAAGAATGCGGAGGAAACAAGAGGAATAATAGTGACGGAGTGTCCTGAAGCGGAGATTGTAGTTATGGCACTTGATCTCAGTTCTCTCAATTCTGTTACCAATTTCGTTACTCGTTTTCATTCCCTCGGTTTCCCTCTCAATCTCCTCATAAACAATGCTGGGAAGTTTGCAGAAGAGCACGCAATCTCTGAGGATGGAGTTGAAATGACCTTTGCCACTAATTATTTAGGTCATTTTCTGATGACAAAAATGTTGATGAAGAAGATGGTTGAAACGGCAAAGGAGACAGGGATACAAGGAAGGATAGTGAACGTGTCGTCCGCAATACACGGTTGGTTTACTGGCGACGTCATCTCCTATTTGGCTCATATATGCCGCAACAAAAGTGAGTACGACGCCACACGTGCTTATGCTCTTTCCAAACTCGCCAACGTTTTCCACACTAACGAGCTTGCTCGCAGATTCAAGGAAATGGATGCCAACGTGACTGTGAACTGCGTTCATCCGGGGGTCGTGAGGACCAGACTCACCAGAGAGCGTGAAGGCTTTCTCACAGATTTAGTTTTCTTCTTGGCCTCCAAGCTCTTAAAGACCATTCCCCAGGCAGCTGCAACAACATGTTATGTGGCAACTAACCCAAGGCTCGTCAATGTGTCCGGCAAGTACTTTGCTGACTGCAACGAAGCCTCAACTTCCAAATTGGGATCCAACATAACTGAAGCTTCAAGGTTATGGGCAGTATCCGAATTAATGATTTCTAAGGGTCCAAAAGCTACCTTTGACCTAATTAATCACCTTGAATTTTGA 1014 0.4694 MLETVKYLIGSAGPSGFGSKSTAEQVTQTCGDLRSITAIITGGTSGIGAETARVLAKRGARVILPARSMKNAEETRGIIVTECPEAEIVVMALDLSSLNSVTNFVTRFHSLGFPLNLLINNAGKFAEEHAISEDGVEMTFATNYLGHFLMTKMLMKKMVETAKETGIQGRIVNVSSAIHGWFTGDVISYLAHICRNKSEYDATRAYALSKLANVFHTNELARRFKEMDANVTVNCVHPGVVRTRLTREREGFLTDLVFFLASKLLKTIPQAAATTCYVATNPRLVNVSGKYFADCNEASTSKLGSNITEASRLWAVSELMISKGPKATFDLINHLEF 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04769 337 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 31 294 IPR036291 -
Mepo2g04769 337 Pfam short chain dehydrogenase 37 178 IPR002347 -
Mepo2g04769 337 CDD retinol-DH_like_SDR_c_like 37 314 - -
Mepo2g04769 337 PRINTS Glucose/ribitol dehydrogenase family signature 163 179 IPR002347 -
Mepo2g04769 337 PRINTS Glucose/ribitol dehydrogenase family signature 113 124 IPR002347 -
Mepo2g04769 337 PRINTS Glucose/ribitol dehydrogenase family signature 229 246 IPR002347 -
Mepo2g04769 337 PRINTS Glucose/ribitol dehydrogenase family signature 37 54 IPR002347 -
Mepo2g04769 337 PRINTS Glucose/ribitol dehydrogenase family signature 206 225 IPR002347 -
Mepo2g04769 337 PANTHER RETINOL DEHYDROGENASE 14 320 - -
Mepo2g04769 337 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 169 177 IPR002347 -
Mepo2g04769 337 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 206 225 IPR002347 -
Mepo2g04769 337 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 113 124 IPR002347 -
Mepo2g04769 337 Gene3D - 22 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04769 Mepo-Chr2 55936699 55940719 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04769 15 247 Acyl Lipid Metabolism Gene Families AT1G63380 25.714 9.81e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04769 - - gmx:100794347 556.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04769 2 55936699 55940719 Mepo2g04769 2 55936699 55940719 ECH