Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04738 ATGAGCTGTTTTTGCTTGATGAAAGGCAAACCAAAAACTAAGCAAGAACAATCCTCCATTCTTGCCTTGGAGACATCATTTACTGTGAATGAGGTTGAGGCTTTACTTGACTTGTTTAAGAAACTAAGTAGTTCAATTATTGATGATGGCTGCATTCACAAGGAGGAGTTCCAACTTGCACTTTTCAGAAATAAGAGCAAGCAGAATCTACTTGCAAGCAGGGTATTTGATATGTTTGATATTAAGCGTAACGGAGTAATTGAATTTGGAGAATTTGTTCGCTCACTAAGCATTTTTCATCCGAAGACATCTGAAGAGAAGAAAATTGAATTTGCATTTAAACTGTTTGACCTTGGGAAGACCGGATACATTGAGCATAGTGAGTTGAAGGAGATGGTATTGGCTACTTTGACCGAATCAGAAGTTACAGTTTCAGATGATATTGTTGAATCCATTGTGGAAAAGACAATGGAGGAGGTTGACTCAAAAGGAGATGGGAAGATTGATATGGAAGAGTGGAAAGAGTATGCAGCAAATAATCCTTCTCTTCTTAAGATCATGACTCTGCCATATCTAAAGGATATAACTATGGCGTTTCCCAGCTTTGTTTTGCACACCGAGGTGGAAGATTAG 633 0.3823 MSCFCLMKGKPKTKQEQSSILALETSFTVNEVEALLDLFKKLSSSIIDDGCIHKEEFQLALFRNKSKQNLLASRVFDMFDIKRNGVIEFGEFVRSLSIFHPKTSEEKKIEFAFKLFDLGKTGYIEHSELKEMVLATLTESEVTVSDDIVESIVEKTMEEVDSKGDGKIDMEEWKEYAANNPSLLKIMTLPYLKDITMAFPSFVLHTEVED 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04738 210 PANTHER CALCINEURIN B 3 210 IPR045198 GO:0005509|GO:0019722|GO:0019900
Mepo2g04738 210 SUPERFAMILY EF-hand 21 203 IPR011992 -
Mepo2g04738 210 ProSiteProfiles EF-hand calcium-binding domain profile. 148 183 IPR002048 GO:0005509
Mepo2g04738 210 SMART efh_1 108 136 IPR002048 GO:0005509
Mepo2g04738 210 SMART efh_1 152 180 IPR002048 GO:0005509
Mepo2g04738 210 SMART efh_1 71 99 IPR002048 GO:0005509
Mepo2g04738 210 FunFam calcineurin B-like protein 3 17 210 - -
Mepo2g04738 210 CDD EFh 108 175 IPR002048 GO:0005509
Mepo2g04738 210 ProSiteProfiles EF-hand calcium-binding domain profile. 104 139 IPR002048 GO:0005509
Mepo2g04738 210 PRINTS Recoverin family signature 13 27 - -
Mepo2g04738 210 PRINTS Recoverin family signature 75 96 - -
Mepo2g04738 210 PRINTS Recoverin family signature 122 140 - -
Mepo2g04738 210 PRINTS Recoverin family signature 168 188 - -
Mepo2g04738 210 Pfam EF-hand domain pair 106 175 IPR002048 GO:0005509
Mepo2g04738 210 Gene3D - 18 210 - -
Mepo2g04738 210 Pfam EF hand 75 94 IPR002048 GO:0005509
Mepo2g04738 210 ProSiteProfiles EF-hand calcium-binding domain profile. 67 102 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04738 Mepo-Chr2 55653179 55656352 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04738 1 210 EF-hand Containing Proteins AT4G17615 55.714 3.50e-86 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04738 K06268 - nnu:104604792 301.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04738 2 55653179 55656352 Mepo2g04738 2 55653179 55656352 ECH