Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04737 ATGATAGATTTTGGAGAGTTTGTTAAAGCTTTAAGTGTTTTCCATCCAGCAGCGCCTCAACCACAAAAGGCAGCTTTTGCATTTCGACTCTATGATATATGGCAAAGAGGCTTTATTGAAAGAGATGAGGTAAGAGAGATGATACTGGCACTCCTAAGAGAATCTGATTTGGTTCTTTCTCATGATATAATTGAGGTCATAATTGATAAGGCCTTTCAAGAAGCTGATTTAAAAGGAGATGGACTGATTGATCAAGAGGAATGGGAAAGTTTTGTTGCTCAAAATCCATCCTTACTGAGGAATATGACAATTCCATATCTGAAACTGGAGTCCACAATAGCAAATGCAAGATATCAGGATGCATGGATCATGCTTCCACAACCCAAACGCTTCTCAAAGGTTCTTACAATCATCAAATCAAATGGAAGATGA 432 0.3796 MIDFGEFVKALSVFHPAAPQPQKAAFAFRLYDIWQRGFIERDEVREMILALLRESDLVLSHDIIEVIIDKAFQEADLKGDGLIDQEEWESFVAQNPSLLRNMTIPYLKLESTIANARYQDAWIMLPQPKRFSKVLTIIKSNGR 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04737 143 Pfam EF hand 68 92 IPR002048 GO:0005509
Mepo2g04737 143 CDD EFh 23 88 IPR002048 GO:0005509
Mepo2g04737 143 PANTHER CALCINEURIN B 1 112 IPR045198 GO:0005509|GO:0019722|GO:0019900
Mepo2g04737 143 Gene3D - 1 122 - -
Mepo2g04737 143 ProSiteProfiles EF-hand calcium-binding domain profile. 19 54 IPR002048 GO:0005509
Mepo2g04737 143 ProSiteProfiles EF-hand calcium-binding domain profile. 63 98 IPR002048 GO:0005509
Mepo2g04737 143 SUPERFAMILY EF-hand 2 111 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04737 Mepo-Chr2 55650605 55652358 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04737 1 108 EF-hand Containing Proteins AT5G24270 62.963 4.55e-48 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04737 K06268 - gmx:100808628 174.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04737 2 55650605 55652358 Mepo2g04737 2 55650605 55652358 ECH