Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04724 ATGGCCTCACACCTCTGCAAATCTGCTTCCAGAGCCGCCAGGTCTCTTCTCTCCGCTTCATTTCACTCTCAAGGACGCGCTGTAGCGGCGGCTGCAGCTGTTGCATCCATCACAAAAGTGCCATTATTTGCTTCAAATTATGGGAGAACTGGTTCTGGAAATGGATCTACCTCATGGATTGCAGGAGCACTCGCTCTTCCCGCTGCAGCTTACATGCTCCAGGATCAGGAGGTGCATGCTGCTGAGCTGGAGCGCACCTTCATTGCCATTAAACCTGACGGAGTTCAAAGAGGACTGATTTCAGAGATTATATCTCGTTTTGAGAGGAAAGGCTACAAACTGGTGGGAATTAAAGTGTTGACTCCTACAAAGGAATTTGCCAAACAGCATTATCATGACCTAAAAGAAAGACCCTTCTTTGATGGCTTGTGTGACTTCCTGAGCTCTGGCCCTGTTATTGCAATGGTGTGGGAAGGACAGGGAGTTATTCTCTACGGCCGTAAACTAATTGGAGCCACAGATCCACAAAAATCAGAGCCAGGAACCATTAGGGGTGATCTGGCTGTTGTTGTTGGAAGAAATATCATCCATGGGAGCGATGGTCCAGAGACTGCAAAGGATGAGATTAACCTGTGGTTTAAGCCAAATGAATTGGTTAGTTTCACAAGCAATTCAGAGAAGTGGGTATATGGTGAAAACTGA 702 0.4687 MASHLCKSASRAARSLLSASFHSQGRAVAAAAAVASITKVPLFASNYGRTGSGNGSTSWIAGALALPAAAYMLQDQEVHAAELERTFIAIKPDGVQRGLISEIISRFERKGYKLVGIKVLTPTKEFAKQHYHDLKERPFFDGLCDFLSSGPVIAMVWEGQGVILYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEINLWFKPNELVSFTSNSEKWVYGEN 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04724 233 Gene3D - 79 233 IPR036850 -
Mepo2g04724 233 SUPERFAMILY Nucleoside diphosphate kinase, NDK 83 230 IPR036850 -
Mepo2g04724 233 PRINTS Nucleoside diphosphate kinase signature 130 149 IPR001564 GO:0004550|GO:0006183|GO:0006228|GO:0006241
Mepo2g04724 233 PRINTS Nucleoside diphosphate kinase signature 86 108 IPR001564 GO:0004550|GO:0006183|GO:0006228|GO:0006241
Mepo2g04724 233 PRINTS Nucleoside diphosphate kinase signature 171 187 IPR001564 GO:0004550|GO:0006183|GO:0006228|GO:0006241
Mepo2g04724 233 PRINTS Nucleoside diphosphate kinase signature 194 213 IPR001564 GO:0004550|GO:0006183|GO:0006228|GO:0006241
Mepo2g04724 233 PRINTS Nucleoside diphosphate kinase signature 150 167 IPR001564 GO:0004550|GO:0006183|GO:0006228|GO:0006241
Mepo2g04724 233 CDD NDPk_I 84 213 - -
Mepo2g04724 233 Pfam Nucleoside diphosphate kinase 84 217 IPR034907 -
Mepo2g04724 233 PANTHER NUCLEOSIDE DIPHOSPHATE KINASE 75 231 - -
Mepo2g04724 233 SMART ndk_5 83 220 IPR034907 -
Mepo2g04724 233 FunFam Nucleoside diphosphate kinase 79 231 - -
Mepo2g04724 233 ProSitePatterns Nucleoside diphosphate kinases active site. 194 202 IPR023005 -
Mepo2g04724 233 Hamap Nucleoside diphosphate kinase [ndk]. 83 218 IPR001564 GO:0004550|GO:0006183|GO:0006228|GO:0006241
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04724 Mepo-Chr2 55549306 55552595 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04724 K00940 - mtr:25502183 428.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04724 2 55549306 55552595 Mepo2g04724 2 55549306 55552595 ECH
Mepo5g00281 5 2454623 2458455 Mepo2g04724 2 55549306 55552595 PCT