Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04719 ATGGAAAAGCTAACACAACTCATTTCTATGCTTCCTCTGTTTTTTCTTCTACTTCCACCACTATCCTTTGCCAGTGGCCATGACTATGGTCAAGCTCTAAGCAAGAGCATTATGTTCTTTGAAGCTCAGAGATCTGGTTATCTTCCTCATAACCAAAGAGTTTCATGGAGATCTCATTCTGGTCTTCAAGACGGTAAAGCAAGTGGGGTAGATCTAGTGGGTGGTTACTATGATGCAGGGGATAATGTCAAATTTGGGTTGCCAATGGCGTTTACTGTTACAATGATGTCATGGAGTATCATTGAATATGGCAAACAAATGGCTAGTAGTGGTGAACTTGGTCATGCCATGGAAGCTGTGAAATGGGGTACTGATTATTTCATCAAAGCTCATCCTCAACCTAATCTTCTCTATGGAGAGGTAGGAGATGGTAACACTGACCATAAGTGTTGGCAAAGACCGGAGGATATGACCACTGACCGTCGCGCTTATAAGGTTGATCCAAGTAATCCCGGGTCGGATCTCGCCGGAGAAACCGCCGCCGCTATGGCTGCTGCTTCCATTGTCTTCCGTCGCTCTAACCCTGCTTATTCCAGAGAACTCCTCCGTCATGCTTATGAGTTGTTTGATTTTGCGGATAAATACAGAGGCAAATATGACAGCAGCATCACAGTTGCACAGAAGTACTATAGATCCATCAGTGGCTACAATGATGAATTGCTTTGGGCTGCTGCATGGTTGTATCAAGCATCTAACAACCAATATTACTTGGATTACCTTGGTCGAAATGGTGACTCCATGGGTGGAACTGGTTGGCAAATGACTGAATTTAGTTGGGATGTTAAGTATCCTGGTGTTCAGACTTTAGTTGCTAAGTTCCTGATGCAAGGGAAAGCAGGCGTTCATGCACCTGTGTTTGAAAAATATCTGCAAAGGTCTGAGTATTTCATGTGTTCATGCATTGGAAAGGGTACTCGCAATATTCAGAAGACACCTGGTGGCCTAATATACCGTCAAAGATGGAACAACCTGCAATTTGCCACAAGTTCCTCCTTTTTAGCCACTGTCTATTCTGATTACCTTGCCTCTTCTGGTAGAAACTTGAAATGTGCTTCTGGAAATGTCCCTTCTTCCCAGCTTCTCTCTTTTGCAAAGTCTCAGGTGGACTACATTCTTGGAGACAACCCAAGAGCTACAAGTTACATGGTTGGATATGGAAACAATTTCCCTCAGAGAGTTCACCACAGAGGTTCATCCATTGTGTCAATCAAGGCTAATCCAAAATTTGTCAGCTGTAATGGAGGTTATGCTACTTGGTTTAGCAGCAAAAAGAGCAACACCAATGTACTAACCGGTGCTATTGTTGGTGGACCTGATGCATATGATGACTTTGCTGATGAAAGAAAGAACTATGAACAAACAGAACCAGCAACCTACAACAATGCTCCTCTTATAGGTGTTCTTGCACGACTCAGTGGTGGTCATGGTGGCTATAACCAGCTCCTTCCAGTTGCTGTTCCAGTTCGTAAGCCTGTTGTTACCAAGCAACATTCATTCACCAAACCAAAAACAACTCCATCCCCAGCTTCATGGTCAGGCCCAATTTCCATTCAGCAGAAAATGACCAGCTCTTGGGTTGCAAATGGAAGAACTTATTATAGATACTCAACAATTGTGACTAACAAATCAACCAAGAATCTCAAGTCTCTCAATCTTTCTATATCCAAGCTTTATGGTCCAATCTGGGGACTCACAAAGTTTGGTGATTCATATACATTCCCAGCATGGATCAACTCGTTGTCAGCAGGTAAAAGCCTTGAGTTTGTCTACATCCATTCTACCACTCCAGCAGATGTCTCAGTTGCGAACTACTCATTGGCCTGA 1884 0.4331 MEKLTQLISMLPLFFLLLPPLSFASGHDYGQALSKSIMFFEAQRSGYLPHNQRVSWRSHSGLQDGKASGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSIIEYGKQMASSGELGHAMEAVKWGTDYFIKAHPQPNLLYGEVGDGNTDHKCWQRPEDMTTDRRAYKVDPSNPGSDLAGETAAAMAAASIVFRRSNPAYSRELLRHAYELFDFADKYRGKYDSSITVAQKYYRSISGYNDELLWAAAWLYQASNNQYYLDYLGRNGDSMGGTGWQMTEFSWDVKYPGVQTLVAKFLMQGKAGVHAPVFEKYLQRSEYFMCSCIGKGTRNIQKTPGGLIYRQRWNNLQFATSSSFLATVYSDYLASSGRNLKCASGNVPSSQLLSFAKSQVDYILGDNPRATSYMVGYGNNFPQRVHHRGSSIVSIKANPKFVSCNGGYATWFSSKKSNTNVLTGAIVGGPDAYDDFADERKNYEQTEPATYNNAPLIGVLARLSGGHGGYNQLLPVAVPVRKPVVTKQHSFTKPKTTPSPASWSGPISIQQKMTSSWVANGRTYYRYSTIVTNKSTKNLKSLNLSISKLYGPIWGLTKFGDSYTFPAWINSLSAGKSLEFVYIHSTTPADVSVANYSLA 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04719 627 Pfam Carbohydrate binding domain CBM49 535 612 IPR019028 GO:0030246
Mepo2g04719 627 PANTHER ENDO-1,4-BETA-GLUCANASE 16 492 - -
Mepo2g04719 627 SMART CBM49_2 535 615 IPR019028 GO:0030246
Mepo2g04719 627 FunFam Endoglucanase 25 496 - -
Mepo2g04719 627 SUPERFAMILY Six-hairpin glycosidases 26 503 IPR008928 GO:0005975
Mepo2g04719 627 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 390 416 IPR018221 -
Mepo2g04719 627 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 464 482 IPR033126 -
Mepo2g04719 627 Gene3D - 26 494 IPR012341 GO:0005975
Mepo2g04719 627 Pfam Glycosyl hydrolase family 9 29 488 IPR001701 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04719 Mepo-Chr2 55511251 55516511 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04719 20 627 Glycoside Hydrolase AT1G64390 78.125 0.0 995
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04719 K01179 - gmx:100801949 1100.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04719 2 55511251 55516511 Mepo2g04719 2 55511251 55516511 ECH