Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04660 ATGGATGTGTTATTGTTATTACTACCTCTGTTGGTTGCTTTGCCAAGCTTGACTATAGTAGAGAGCCGCAAAACACCGGTTGAGGACTACTATTTTGAGTATTGTGCTGTGAGCTGCAGAGCTTACAGTGCCTCAGTGACAGAATTTGGAGCAGTCGGCGATGGAAATACTTTGAACACGAAAGCTTTTCAGACAGCAATAGATCATCTGAGTCAGTACTCATCAAATGGTGGTTCTCAACTTTATGTTCCACCAGGAAGATGGTTGACTGGTAGCTTCAATCTCACCAGTCATTTCACTTTATTCCTGCACAAAGATGCTGTCATTCTTGGTTCTCAGGATGAAAGTGAATGGCCGGTGATTGATCCCTTGCCGTCTTATGGTAGAGGGAGGGACACTCAGGGTGGAAGGTATAGCAGTCTAATTTTTGGAACCAACCTCACTGATGTTGTCATAACAGGGAACAATGGCACACTAGATGGACAAGGTGAACTGTGGTGGCAAAAGTTTCACAAGGGGAAGCTCACTTATACTAGGCCTTACCTGATTGAAATCATGTACTCAGATAATATTCAGATATCTAATCTCACTTTGCTTAATTCTCCATCTTGGAATGTCCATCCTGTTTACAGCAGCAACATTATTGTTCAAGGCATCACAATTCTTGCTCCTGTGAATTCACCAAATACAGATGGGATCAACCCTGACTCTTGTACGAACACGCGAATTGAGGACTGTTATATAGTGTCTGGGGACGACTGTGTGGCCGTGAAGAGTGGTTGGGATGAGTATGGTATAGCTTATGGAATGCCAACTAAGCAGCTGGTAATAAGAAGACTCACTTGTATTTCTCCAACCAGTGCTGTGATTGCTTTAGGGAGCGAAATGTCTGGTGGGATTCAAGACGTCAGGGCCGAGGATATTGTGGCGATCAATTCGGAATCAGGAGTTAGGATCAAAACTGCTGTTGGAAGAGGAGGATATGTCAAGGACATATATGTTAGAAGAATGACTATGAAAACCATGAAATGGGCATTTTGGATGACAGGAGATTATGGTTCTCATGCTGATAATCACTATGATCCTAATGCAATTCCTGTAGTTCAGAATATTAATTATCGCGATATGGTTGCTGAAAATGTGACTATGGCAGCAAAGTTGGAGGGTATATCTAATGCACCGTTTACTGGAATCTGCATATCTAATGTAACCATTGGATTAGCAAAGAAGGCTAAAAAACTTCCGTGGAATTGCACCTATATTGCTGGGGTTTCAAGTGGTGTGACTCCTGCGCCATGTGGCCTGTTGCCAGACCAAGGAGTTGAGAAAATTGGGTCATGCGCCTTCCCAGAAGACAATTGGCCCATTGATGATGTCCAGGTTCAAACGTGTACTTATAGAAGGAATTTGTGA 1413 0.4296 MDVLLLLLPLLVALPSLTIVESRKTPVEDYYFEYCAVSCRAYSASVTEFGAVGDGNTLNTKAFQTAIDHLSQYSSNGGSQLYVPPGRWLTGSFNLTSHFTLFLHKDAVILGSQDESEWPVIDPLPSYGRGRDTQGGRYSSLIFGTNLTDVVITGNNGTLDGQGELWWQKFHKGKLTYTRPYLIEIMYSDNIQISNLTLLNSPSWNVHPVYSSNIIVQGITILAPVNSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPTSAVIALGSEMSGGIQDVRAEDIVAINSESGVRIKTAVGRGGYVKDIYVRRMTMKTMKWAFWMTGDYGSHADNHYDPNAIPVVQNINYRDMVAENVTMAAKLEGISNAPFTGICISNVTIGLAKKAKKLPWNCTYIAGVSSGVTPAPCGLLPDQGVEKIGSCAFPEDNWPIDDVQVQTCTYRRNL 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04660 470 Gene3D - 28 424 IPR012334 -
Mepo2g04660 470 PANTHER PECTIN LYASE-RELATED 12 458 - -
Mepo2g04660 470 Pfam Pectate lyase superfamily protein 45 101 IPR024535 -
Mepo2g04660 470 Pfam Glycosyl hydrolases family 28 136 420 IPR000743 GO:0004650|GO:0005975
Mepo2g04660 470 SUPERFAMILY Pectin lyase-like 36 438 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04660 Mepo-Chr2 54952939 54955320 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04660 32 468 Glycoside Hydrolase AT4G23500 75.515 0.0 701
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04660 - - gmx:100785841 850.892
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04660 2 54952939 54955320 Mepo2g04660 2 54952939 54955320 ECH