Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04581 ATGTCTCTCATAAAAATATTATTATTGCCTATATTGGCTCTCTGTTTAATATCTACGCAAGCAGCAAGGTTCGACATAGTAAACCGATGCTCCTACACCGTGTGGCCAGCCGGCATTCCCAGGGGTGGCGGTCGGCAATTGAACTCGGGCCAAACATGGGCCTTGGACATCCCAGCAGGAACCTCAGCGGCCCGAATTTGGGGCCGAACCGGTTGCAAATTTGACGGTTCAGGCCGTGGTAGTTGTCAAACCGGTGATTGCGGTGGAGCCCTCAGTTGCAGCGTATCCGGTAGACCTCCGACCACACTTGCAGAATACACACTTAACGGTGGAAACAATTTGGATTACTTAGATATATCCGTGATTGATGGTTTCAACATGCCAATGCAATTTAGTTCAACTTCTAATGGATGCAACAAAGTACTAACCTGCAGGGATTCTAATTGCCCTGATGCTTATCATCAACCTAATGATGTTAAAACTGTTACATGCCCTGGTGGTACCAACTATAGAATTGTCTTTTGCCCTTGA 531 0.467 MSLIKILLLPILALCLISTQAARFDIVNRCSYTVWPAGIPRGGGRQLNSGQTWALDIPAGTSAARIWGRTGCKFDGSGRGSCQTGDCGGALSCSVSGRPPTTLAEYTLNGGNNLDYLDISVIDGFNMPMQFSSTSNGCNKVLTCRDSNCPDAYHQPNDVKTVTCPGGTNYRIVFCP 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04581 176 Gene3D Thaumatin 144 176 IPR037176 -
Mepo2g04581 176 Pfam Thaumatin family 28 141 IPR001938 -
Mepo2g04581 176 ProSiteProfiles Thaumatin family profile. 21 176 IPR001938 -
Mepo2g04581 176 SMART tha2 24 176 IPR001938 -
Mepo2g04581 176 PANTHER OS03G0233200 PROTEIN 147 176 IPR001938 -
Mepo2g04581 176 PIRSF PR5 1 147 IPR001938 -
Mepo2g04581 176 PIRSF PR5 143 176 IPR001938 -
Mepo2g04581 176 CDD TLP-P 24 176 - -
Mepo2g04581 176 ProSitePatterns Thaumatin family signature. 78 93 IPR017949 -
Mepo2g04581 176 Gene3D Thaumatin 22 143 IPR037176 -
Mepo2g04581 176 SUPERFAMILY Osmotin, thaumatin-like protein 22 176 IPR037176 -
Mepo2g04581 176 PRINTS Pathogenesis-related protein signature 115 131 IPR001938 -
Mepo2g04581 176 PRINTS Pathogenesis-related protein signature 23 35 IPR001938 -
Mepo2g04581 176 PRINTS Pathogenesis-related protein signature 65 76 IPR001938 -
Mepo2g04581 176 PRINTS Pathogenesis-related protein signature 43 52 IPR001938 -
Mepo2g04581 176 PRINTS Pathogenesis-related protein signature 78 107 IPR001938 -
Mepo2g04581 176 PRINTS Pathogenesis-related protein signature 166 175 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04581 Mepo-Chr2 54239753 54240714 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04581 24 149 Receptor kinase-like Gene Family AT5G38280 38.971 1.19e-24 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04581 - - psat:127102054 263.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04581 2 54239753 54240714 Mepo2g04581 2 54239753 54240714 ECH
Mepo5g00370 5 3244671 3245680 Mepo2g04581 2 54239753 54240714 PCT