Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04561 ATGGACCTTATTCATCAGTTCCTGAACATAGTAGCTCCTCCATTCACCTTCTTTTCCTTACTCCTTTTCTTACCACCGTATTGGACCTTCAAATTCTTCCTTTCCATTATCTTTACATTCTTCCCTGAAAATGTTGCTGGTAAAGTTGTTCACATCACTGGTGCTTCCTCTGGTATTGGAGAGCATTTGGCTTACGAGTATGCTAAGAGAGGTGTACGATTAGCACTCTCTGCTAGAAGAGACACAGCACTGCGTGAAGTTGCTGATAGAGCTCGTGATTTTGGTTCCCCTGATGTTATTATAATGCGTGCAGATGTTTCCAAAGTTGATGATTGTAGACGTTTGGTCGATGAAACTGTTAACCATTTTGGTAGACTGGATCATTTGGTAAACAATGCTGCAATCAGTGCTGCCATGATGTTTGAAGATGTAACTGATATCACCAATTGGAGACCTCTCATGGACACAAACTTTTGGGGATCAGTTTACACAACCCGTTTTGCTTTACCACACCTCAAAAATAGTAGAGGCAAAATTGTGGTCCTTTCATCAATTGATTCTTGGATGCCTGCACCCAGAAGGAGTATATATAATGCAAGCAAAGCAGCATTAGTAAGTCTTTATGAAACATTGAGGGTTGAAGTTGGAGCAGACATAGGTGTAACAATTGTTACACCAGGCTACATAGAATCTGAATTAACCAAAGGCAAAGTCTTATTACCACCAGAAGGCAAAATGGGCGTGGACCAAGATATGAGAGATGTTGAAGTGAGTGCAACACCAGTGGGGTCAGTGAGTGAATGTGCAAAATCAATAGTGAATGGTACATTGAGGGGAGATAGGTACTTGACTGCACCAGCTTGGTTTAGAATGACATATGTTGTGAAAGTGTTATGTCCAGAATTGTTGGAGTGGAGTTTCAGAATGTTGTACTTGACTAGATCAAGTAATACTCCAGCAAGAGAAGCACCTAGTAAAAAGATTTTGGATGCTACTAGGATCAAAAATGTGTTCTATCCATCTTCAATTCGATCTCCTGAGATCAAGACTGAATGA 1056 0.4053 MDLIHQFLNIVAPPFTFFSLLLFLPPYWTFKFFLSIIFTFFPENVAGKVVHITGASSGIGEHLAYEYAKRGVRLALSARRDTALREVADRARDFGSPDVIIMRADVSKVDDCRRLVDETVNHFGRLDHLVNNAAISAAMMFEDVTDITNWRPLMDTNFWGSVYTTRFALPHLKNSRGKIVVLSSIDSWMPAPRRSIYNASKAALVSLYETLRVEVGADIGVTIVTPGYIESELTKGKVLLPPEGKMGVDQDMRDVEVSATPVGSVSECAKSIVNGTLRGDRYLTAPAWFRMTYVVKVLCPELLEWSFRMLYLTRSSNTPAREAPSKKILDATRIKNVFYPSSIRSPEIKTE 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04561 351 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 184 212 IPR020904 GO:0016491
Mepo2g04561 351 PANTHER RETINOL DEHYDROGENASE-RELATED 46 316 - -
Mepo2g04561 351 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 124 135 IPR002347 -
Mepo2g04561 351 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 197 216 IPR002347 -
Mepo2g04561 351 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 177 185 IPR002347 -
Mepo2g04561 351 Pfam short chain dehydrogenase 48 236 IPR002347 -
Mepo2g04561 351 PRINTS Glucose/ribitol dehydrogenase family signature 217 234 IPR002347 -
Mepo2g04561 351 PRINTS Glucose/ribitol dehydrogenase family signature 49 66 IPR002347 -
Mepo2g04561 351 PRINTS Glucose/ribitol dehydrogenase family signature 124 135 IPR002347 -
Mepo2g04561 351 PRINTS Glucose/ribitol dehydrogenase family signature 171 187 IPR002347 -
Mepo2g04561 351 PRINTS Glucose/ribitol dehydrogenase family signature 197 216 IPR002347 -
Mepo2g04561 351 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 41 312 IPR036291 -
Mepo2g04561 351 Gene3D - 38 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04561 Mepo-Chr2 54067104 54068864 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04561 43 234 Acyl Lipid Metabolism Gene Families AT1G24360 30.612 1.05e-18 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04561 K22418 - zju:107403456 469.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04561 2 54067104 54068864 Mepo2g04561 2 54067104 54068864 ECH