Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04560 ATGGCAAGAAAAGTAGTACTAATCACTGGAGCCGCTTCTGGAATTGGCGAGCAACTAGCTTATGAGTATGCTAGACGAGGAGCAAGGTTGTCACTTGTTGACATTAGAATGGAGAATCTTGAAGCAGTGGCTGATATGGCAAGGTCTCTTGGTTCCCCTGATGTTATCATTATTGGTGCAGATGTGACCAAGGTTGAAGATAGTAAGCGGTTTGTTGATGAAACAGTGAACCACTTTGAACGATTGGATCATCTTGTAAACAATGCTGGAGTTATTGGGGTTCCAAGGTTGGTAGAGGATTTTTCGGATTTGTCTAAATACACACAAATTATGGAAACAAACTTCTGGGGAGCAGCTCATGGCACTTTATATGCAATCCCACATCTTAAAAATAGTAAAGGCAGGATCATAGTGGTTGCTTCAGCTTGTGGGTGGTTTCCAATTCCAAGACTCGGTGTCTATAATGCTAGTAAGGCAGCGATAATAAGATTCTTTGAGACATTAAGAATTGAACTTGGTTGGTCTATTGGCATAACAATTGCCACACCTGGTTTTATCAAAACAGACCTGGCATTCAGGGTCATTGAAGATGAGGCTACTCTTGGAAGACTTCCATTGGGTTCATCAGTTGAATGTGCCAAAGACATAGTGAAAAGTGCATGCAGGGGAGATATGTATGTGACAAACCCTTCATGGGTCAAAGTAATTTTTTATTGGAAGGTGTTTTATCCCCACCTGGTGGACTGGACCCAACGACACATCTTTGGGATTTTGACAAACCCTTACTGGAAGAATGGTAATGTGGTTATGTCCAAGAGTTACCAAGAGCTTAAGGTAGAATAA 843 0.4152 MARKVVLITGAASGIGEQLAYEYARRGARLSLVDIRMENLEAVADMARSLGSPDVIIIGADVTKVEDSKRFVDETVNHFERLDHLVNNAGVIGVPRLVEDFSDLSKYTQIMETNFWGAAHGTLYAIPHLKNSKGRIIVVASACGWFPIPRLGVYNASKAAIIRFFETLRIELGWSIGITIATPGFIKTDLAFRVIEDEATLGRLPLGSSVECAKDIVKSACRGDMYVTNPSWVKVIFYWKVFYPHLVDWTQRHIFGILTNPYWKNGNVVMSKSYQELKVE 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04560 280 Gene3D - 1 258 - -
Mepo2g04560 280 Pfam short chain dehydrogenase 4 196 IPR002347 -
Mepo2g04560 280 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 IPR002347 -
Mepo2g04560 280 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 IPR002347 -
Mepo2g04560 280 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 IPR002347 -
Mepo2g04560 280 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 2 257 IPR036291 -
Mepo2g04560 280 PANTHER RETINOL DEHYDROGENASE-RELATED 1 251 - -
Mepo2g04560 280 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 141 169 IPR020904 GO:0016491
Mepo2g04560 280 PRINTS Glucose/ribitol dehydrogenase family signature 5 22 IPR002347 -
Mepo2g04560 280 PRINTS Glucose/ribitol dehydrogenase family signature 174 191 IPR002347 -
Mepo2g04560 280 PRINTS Glucose/ribitol dehydrogenase family signature 128 144 IPR002347 -
Mepo2g04560 280 PRINTS Glucose/ribitol dehydrogenase family signature 80 91 IPR002347 -
Mepo2g04560 280 PRINTS Glucose/ribitol dehydrogenase family signature 154 173 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04560 Mepo-Chr2 54059979 54061738 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04560 5 207 Acyl Lipid Metabolism Gene Families AT1G24360 29.327 1.70e-15 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04560 K22418 - gmx:100808990 388.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04560 2 54059979 54061738 Mepo2g04560 2 54059979 54061738 ECH