Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04525 ATGGTAGTTTCTTATCACGAAGAACAAACGCATAGGAAGCCAATGGAGGAACACGAACAAAACGGAATTACTAGTACTACTAGTTTTATTGATGAAGAAGAACAAGAAGAAGCATTGATTGCTCTCGTCAACCACCGTTGTCGTCAAGTCAAAAACCTCCATGACCAGCTTAAGAAAGCAGAAGAGAAGTACCGAAATTCTAAATCCAAGTTGGCTCTTTTTCAAGGTGAAAAAAATGGGGGTATATTAGATGCTGGAAAGACAAAGCATGGATCAAACAGTCTTATTCGTAAAAATGAAACTCCTTCCAAAATCCTTCATCAATCAAAGGCTGAACATTTTAGTCCAAAAACCTCACAATGCATACGGTTACCAGATTCTGCAAAAGCTTTAATAAATTATTACTCTGGAGCTACCCTTACTCAGAGATTTCCCATCGAGCTGGATAACAAAGGAACGAAAAGGAAGTATGAAATAAAGGAGCAAAAGTATTTGGTTCCTTTGATATGTAGAAGTTCTTCAGCACAATCGGTGAACTATAGAATGAGAAGCTGCGTATCAAGTCTACACAAGAAGAGATTGAGAAGTCTTGCTCTGTGTCCTTTGAATGATCAACTTTTTGTGACTAGTGCTTTGGATGGAGTGATCCGCTTGTGGGAAGTTCAACCTCGAGGATTAGGAGCCAGACTGCTCAGCACTACTGATTGCGCATCTGCAGAGCAGAAGAGATGGCCGGAAGATATAGCTTGGCATCCAGAAGGAAAGAGCCTTTTTTCAGTTTATAGTGCTGATAGTCCTGACTCTCAAGTATCAGTTACAAATTTTAAAGATGGTGAAAGGAGTGGACAAGTCAATTTCTTACAAGACAAGCCTCATGTTAAGGGTGCTATCAATAGCATTGTTTTTCTGCCTTGGGAATATACCAGCTTTGTTACAGCAGGAACTGACCATACTGTCATGCTATGGAGTGAGAATGATGAGAAAAAATGGAAGTCAGAACCATTGCATAGGAATATTCATACTTCTGCTGTAATGGGAGTTGCTGGTGTTCAGCACAAGAAAATTGTGCTATCTGTTGGTCAAGACAAGAGAATTTTAGGGTACAATGCTCACGTGGGAAGACAAGATTTTATACATCAGGTTGATAGTAAATGCTTGAGTATCTTGCCAAATCCAGTTGACTTCAATTTGTTCATGGTTCAAACAGGGACTCATGAGAAGCAACTTCGATTATTTGATATTAGATTGAAGCAGAAAGAGGTTCATGCATTTGGGTGGAAGCAAGAAAGAAGGGATACACAATCAGCTCTAGTAAATCAGGATTGGTCTCCCAATGGATTATACATAACATCTGGTTCAGATGATCCATTGATTCACATATTTGATATTAGATATAATGGTCATGAGCCTTCACAATCTATCAAAGCTCATCAGAAAAGAGTCTTCAGAGCCATCTGGCATCACTCTCGTCCACTTCTCATTTCCATATCATCTGATTCCAACATTGGATTCCACAAGCCTGTATAG 1527 0.3936 MVVSYHEEQTHRKPMEEHEQNGITSTTSFIDEEEQEEALIALVNHRCRQVKNLHDQLKKAEEKYRNSKSKLALFQGEKNGGILDAGKTKHGSNSLIRKNETPSKILHQSKAEHFSPKTSQCIRLPDSAKALINYYSGATLTQRFPIELDNKGTKRKYEIKEQKYLVPLICRSSSAQSVNYRMRSCVSSLHKKRLRSLALCPLNDQLFVTSALDGVIRLWEVQPRGLGARLLSTTDCASAEQKRWPEDIAWHPEGKSLFSVYSADSPDSQVSVTNFKDGERSGQVNFLQDKPHVKGAINSIVFLPWEYTSFVTAGTDHTVMLWSENDEKKWKSEPLHRNIHTSAVMGVAGVQHKKIVLSVGQDKRILGYNAHVGRQDFIHQVDSKCLSILPNPVDFNLFMVQTGTHEKQLRLFDIRLKQKEVHAFGWKQERRDTQSALVNQDWSPNGLYITSGSDDPLIHIFDIRYNGHEPSQSIKAHQKRVFRAIWHHSRPLLISISSDSNIGFHKPV 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04525 508 MobiDBLite consensus disorder prediction 1 22 - -
Mepo2g04525 508 SUPERFAMILY WD40 repeat-like 186 505 IPR036322 GO:0005515
Mepo2g04525 508 Pfam WD domain, G-beta repeat 439 462 IPR001680 GO:0005515
Mepo2g04525 508 Gene3D - 178 375 IPR015943 GO:0005515
Mepo2g04525 508 ProSiteProfiles Trp-Asp (WD) repeats profile. 187 222 IPR001680 GO:0005515
Mepo2g04525 508 SMART WD40_4 182 220 IPR001680 GO:0005515
Mepo2g04525 508 SMART WD40_4 425 462 IPR001680 GO:0005515
Mepo2g04525 508 SMART WD40_4 283 323 IPR001680 GO:0005515
Mepo2g04525 508 SMART WD40_4 467 506 IPR001680 GO:0005515
Mepo2g04525 508 SMART WD40_4 331 369 IPR001680 GO:0005515
Mepo2g04525 508 Coils Coil 43 77 - -
Mepo2g04525 508 Gene3D - 379 507 IPR015943 GO:0005515
Mepo2g04525 508 PANTHER TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN 98 507 - -
Mepo2g04525 508 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04525 Mepo-Chr2 53675284 53680697 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04525 - - tpra:123914527 678.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04525 2 53675284 53680697 Mepo3g06945 3 83087019 83093031 PCT