Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04408 ATGAAAGCTGGAACGGTTCAGATTAATTGGCACGAGAGCAAACCCGTTTTAACCCTAGATTTCCATCCTCTCTCCTCAACTCTCGCCACCGCCGGCGCCGATTTCGACATCAAGTTATGGTCAGTTAAACCTTCTGGATCACAAAAGAAGCTTCCAGTAGTTACTTATCTTAATAGTCTCTCTTATCATAGTTCCGCTGTTAATGTTATTCGATTCTCTTCTTCCGGGGAATTGTTAGCTTCTGGTTCTGATGGAGGTGAATTGTTAATATGGAAGCTACATTCAACGGATACCGGCCAAACATGGAAGGTTCTTAAGATGTTACGATCTCATGTCAAGGACATTATGGACCTGGAGTGGTCTACTGATGGTGGATATATCATATCCGGATCAGTTGATAATTCTTGCATTATATGGGATGTTAACAAAGGAACTAACCTTCAGACGTTAGATACCCATGCACACTATGTTCAGGGGGTAGCATGGGACCCTTTAGGGAAGTATATTGCTTCTCTTAGTTCTGACCGGACTTGCCGAATTTACATCAGTAAGCCCCATAAATCAAAGGGTGTTGAGAGAATCAATTACGCTTGCAAGCATGTTATTTCAAAGGCAGAACAGCCATTATTAAAGAATTCTAAGTCGACAAAATATCATCTCTTCCATGATGAAACATTGCCCTCTTTCTTTAGAAGATTAGCTTGGTCTCCAGATGGTTCATTTCTACTTGTGCCTGCAGGTTCTTACAAAATCGGTACAGCGTCTGAATCTGTAAATGCAGCTTACATATTTTCTAGAAAAGATCTTTCTCGGCCTGCTATACAGCTTCCTTGTGCAAGCAAAGCTGTTGTAGCTGTTCGATTCTGTCCTGTATTATTTAAGCTTAAGGGAACAAATTCAGATGGGTTATTTATGCTCCCATATCGCATTGTATTTGCCGTGGCCACATTGAATTCATTGTACATTTATGACACTGAGAGCACTTCTCCAATAGCAATATTTGCTGGCCTTCACTATGCTCCAGTAACAGATATTACCTGGTCACCTGATGCCCATTATTTAGCATTCTCCTCGCAAGATGGTTTCTGCTCTTTGGTGGAGTTCGAAAATGACGAACTTGGATCACCTTACTGCTTATCAAAAGAAAATGTCTTGGAGGACTGTAAAAGCTCCCTTCAGACAGCCAATGATGCTGTACTGCCAACTGGGAGTGTTGGTGCAGTTGTAGCTGAAAGCATGAAAATGGAAGTAGAAGAAAAGGTTGATGACATGGACATAGAAGCATCTGGGGATATTGGGGGAGTCACATCAGAAAGCAGCAAAACTGTAATACAAGATAAGGCTGATGACGTGATCATCAAATCAACTGGGAATGTTGGTACAATTATAGCAGACAATAGGAAAAATGAAGCAGAACATAAAGCTGATGATATGGTCATTGAAGAAGTTACGGCAGATATTAGGAAAAATGAAGCAGAGGAGAAGGCTGCTGACATGATCATTGAGACAACTGGGACTGCAAATATTGGAGCAGCTCTATTAGATAATAGAAAAACCGAAGACACAGAAGATAAACTGCATAGTGGTTTAGGCAGTATTAATTCTGGAGCCGAAGAGAAGGCGTCAAAACAACCAGCTAATCCAGATGGTAAACAAAGTGAAGCAGAAGAGAAGGCAGATAAACCACAATCAACTTCGGTCAGCATAAAATCTGAGGCAGCACAAAAGACAGGGAATCAATCGTGCAGTTCAAAGAGCACACCCATCTCAAATAAGCCAGCCAAGAAGCGCATTACACCTATTGCAATTGATCCATGA 1818 0.4131 MKAGTVQINWHESKPVLTLDFHPLSSTLATAGADFDIKLWSVKPSGSQKKLPVVTYLNSLSYHSSAVNVIRFSSSGELLASGSDGGELLIWKLHSTDTGQTWKVLKMLRSHVKDIMDLEWSTDGGYIISGSVDNSCIIWDVNKGTNLQTLDTHAHYVQGVAWDPLGKYIASLSSDRTCRIYISKPHKSKGVERINYACKHVISKAEQPLLKNSKSTKYHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKIGTASESVNAAYIFSRKDLSRPAIQLPCASKAVVAVRFCPVLFKLKGTNSDGLFMLPYRIVFAVATLNSLYIYDTESTSPIAIFAGLHYAPVTDITWSPDAHYLAFSSQDGFCSLVEFENDELGSPYCLSKENVLEDCKSSLQTANDAVLPTGSVGAVVAESMKMEVEEKVDDMDIEASGDIGGVTSESSKTVIQDKADDVIIKSTGNVGTIIADNRKNEAEHKADDMVIEEVTADIRKNEAEEKAADMIIETTGTANIGAALLDNRKTEDTEDKLHSGLGSINSGAEEKASKQPANPDGKQSEAEEKADKPQSTSVSIKSEAAQKTGNQSCSSKSTPISNKPAKKRITPIAIDP 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04408 605 ProSitePatterns Trp-Asp (WD) repeats signature. 127 141 IPR019775 -
Mepo2g04408 605 SMART WD40_4 327 367 IPR001680 GO:0005515
Mepo2g04408 605 SMART WD40_4 53 92 IPR001680 GO:0005515
Mepo2g04408 605 SMART WD40_4 3 41 IPR001680 GO:0005515
Mepo2g04408 605 SMART WD40_4 143 182 IPR001680 GO:0005515
Mepo2g04408 605 SMART WD40_4 101 140 IPR001680 GO:0005515
Mepo2g04408 605 SUPERFAMILY WD40 repeat-like 11 365 IPR036322 GO:0005515
Mepo2g04408 605 ProSiteProfiles Trp-Asp (WD) repeats profile. 108 149 IPR001680 GO:0005515
Mepo2g04408 605 MobiDBLite consensus disorder prediction 535 549 - -
Mepo2g04408 605 MobiDBLite consensus disorder prediction 564 593 - -
Mepo2g04408 605 FunFam Chromatin assembly factor 1 subunit FAS2 4 250 - -
Mepo2g04408 605 MobiDBLite consensus disorder prediction 519 605 - -
Mepo2g04408 605 PANTHER CHROMATIN ASSEMBLY FACTOR 1 SUBUNIT B 1 605 IPR045145 GO:0006335
Mepo2g04408 605 Pfam WD domain, G-beta repeat 11 41 IPR001680 GO:0005515
Mepo2g04408 605 Pfam WD domain, G-beta repeat 103 140 IPR001680 GO:0005515
Mepo2g04408 605 Pfam WD domain, G-beta repeat 144 181 IPR001680 GO:0005515
Mepo2g04408 605 Pfam WD domain, G-beta repeat 58 92 IPR001680 GO:0005515
Mepo2g04408 605 Gene3D - 186 400 IPR015943 GO:0005515
Mepo2g04408 605 Gene3D - 2 185 IPR015943 GO:0005515
Mepo2g04408 605 ProSiteProfiles Trp-Asp (WD) repeats profile. 16 50 IPR001680 GO:0005515
Mepo2g04408 605 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 108 144 - -
Mepo2g04408 605 ProSiteProfiles Trp-Asp (WD) repeats profile. 150 181 IPR001680 GO:0005515
Mepo2g04408 605 ProSiteProfiles Trp-Asp (WD) repeats profile. 60 101 IPR001680 GO:0005515
Mepo2g04408 605 PRINTS Beta G protein (transducin) signature 108 124 IPR001632 -
Mepo2g04408 605 PRINTS Beta G protein (transducin) signature 127 141 IPR001632 -
Mepo2g04408 605 PRINTS Beta G protein (transducin) signature 164 181 IPR001632 -
Mepo2g04408 605 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 60 95 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04408 25 181 Miscellaneous Gene Families AT5G08390 27.215 6.92e-13 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04408 K10751 - gmx:547606 874.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04408 2 52607763 52613141 Mepo2g04408 2 52607763 52613141 ECH