Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04293 ATGGCCAACACATTCTTACACAACAACACCACGTGTACAATCTCTTTCCCTGATAAATCTCTCCCCGCTATTTCCGTTTCTCGCCACAGATCTCTCTCTTTCTCCTCAAACCTTTCCACTTTTCCCAATATGAGCACCGGGGTAGAGCAGAACAGAAGAGAAACAATAATTGTCAAGTCAAAATCCGATTCTGAATTGGAAGTTGATATTTCCTTGAGTCCACGTGTTAATGCTGTTAAACCTTCAAGAACTGTAGCGATAACTGATCAAGCCACCGCTCTTGTTCAAGCTGGCGTTCCTGTTATTCGCTTGGCCGCCGGTGAACCTGATTTTGATACACCCGCTGTTATTGCCGAGGCTGGGATTAATGCGATTCGTGAAGGATACACAAGGTATACCCCTAATGCTGGAACGTTAGAAATACGCCAAGCAATTTGTCATAAGCTTAAAGAGGAGAATGGACTTGATTATACTCCTGATCAGATTGTTGTTACTAATGGAGCTAAGCAGAGTATTACTCAGGCAGTGATTGCAGTTTGCTCACCAGGAGATGAGGTCATAATTCCAGCTCCATTTTGGGTTAGTTACCCAGAAATGGCAAGGTTGGCTGATGCAACACCTGTGATTCTTCCAACGTCAATATCCAATAATTTCCTTTTAGATCCCAAACTCCTTGAGTCCAAAATTACTGAAAAGTCAAGACTACTTATTCTTTGTTCACCATCTAACCCGACAGGATCTGTCTATCCTAAGCATTTACTTGAAGAGATAGCCAAGATTGTAGCAAAGCACCCGAGGCTTCTGGTTATCTCTGATGAAATTTATGAACACATAATTTATGCCCCAGCAAAACATACAAGCTTTGCATCTTTACCCAGAATGTGGAACAGAACTCTAACCGTGAATGGATTTTCTAAGGCCTTTGCAATGACGGGTTGGCGGCTTGGATATATTGCTGGCCCGAAGCATTTTATTACAGCAGTCGGAAAGATCCAAAGTCAGTTCACTTCAGGGCCTAGCAGTATATCCCAGAAAGCCGGAGTTGCTGCATTAGGACTAGGCTATGCTGGTGGGGAGGCTGTTTCTACCATGGTGAAAGCATTTAGAGAACGAAGAGATTACTTGGTTAAAAGTTTTAGCGAAATTGATGGTGTTAAAATATCTGAACCACAGGGGGCATTTTATTTATTCATTGATTTCAGCTCCTATTATGGAAGAGAAGCCGAGGGATTTGGTAAAATTGAGAATTCCGAGTCTCTCTGTCGATATCTGTTGGATAAAGGCCAGGTAGCACTTGTTCCAGGGAGTGCATTTGGTGACGATACTTGCATCCGTATCTCTTATGCGGCATCCTTTCCCACCCTACAGGCAGCTGTAGAGAATATTAAGAAAGCACTCATCCCTCTTACATCAGCTGCACTTGTTTAA 1428 0.4286 MANTFLHNNTTCTISFPDKSLPAISVSRHRSLSFSSNLSTFPNMSTGVEQNRRETIIVKSKSDSELEVDISLSPRVNAVKPSRTVAITDQATALVQAGVPVIRLAAGEPDFDTPAVIAEAGINAIREGYTRYTPNAGTLEIRQAICHKLKEENGLDYTPDQIVVTNGAKQSITQAVIAVCSPGDEVIIPAPFWVSYPEMARLADATPVILPTSISNNFLLDPKLLESKITEKSRLLILCSPSNPTGSVYPKHLLEEIAKIVAKHPRLLVISDEIYEHIIYAPAKHTSFASLPRMWNRTLTVNGFSKAFAMTGWRLGYIAGPKHFITAVGKIQSQFTSGPSSISQKAGVAALGLGYAGGEAVSTMVKAFRERRDYLVKSFSEIDGVKISEPQGAFYLFIDFSSYYGREAEGFGKIENSESLCRYLLDKGQVALVPGSAFGDDTCIRISYAASFPTLQAAVENIKKALIPLTSAALV 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04293 475 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 303 316 IPR004838 GO:0003824|GO:0009058|GO:0030170
Mepo2g04293 475 CDD AAT_like 102 464 - -
Mepo2g04293 475 FunFam Aspartate aminotransferase 131 353 - -
Mepo2g04293 475 PANTHER ASPARTATE AMINOTRANSFERASE 70 467 - -
Mepo2g04293 475 Gene3D - 131 353 IPR015421 GO:0003824
Mepo2g04293 475 Pfam Aminotransferase class I and II 100 460 IPR004839 GO:0009058|GO:0030170
Mepo2g04293 475 Gene3D Aspartate Aminotransferase, domain 1 85 460 IPR015422 GO:0003824
Mepo2g04293 475 SUPERFAMILY PLP-dependent transferases 72 466 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04293 Mepo-Chr2 51589914 51594239 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04293 K15849 - gmx:100776446 736.873
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04293 2 51589914 51594239 Mepo2g04293 2 51589914 51594239 ECH
Mepo2g04293 2 51589914 51594239 Mepo3g05632 3 70296616 70299600 PCT