Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04174 ATGCATCAACTTGAAGTACTCATCATCTTCCTCCCATTCCTCCTCGGTTTAACCCTAACATTCAACCACTTCATCACACTCATTATATGGATCGTCAACACTTGTCTCCGATCTGACAAACACCTCATCAAAACCTATGGTTCATGGGCTTTAATCACCGGAGCAACTGACGGCATCGGAAAAGCCCTAGCCTACCAACTAGCACAGAAAAGTCTCAACCTCATTCTTGTAAGTAGAAACTCTAAAAAACTTGAAACAGTTAAAAACGAAATCATAACAAAACATCTTCATGTTCACATAAAAACAATCACCATCGACTTTTCCGGAGACTTCACTGAAAGTCTCCGGGAAATAGAAGTTTTGGCTAGAGATTTGGATCTTGGAATATTGATCAACAATGTTGGGATAACTTATCCTAAGGCTATGTTTTTTCATGAGGTGAAGGAGGAATTGTGGATGAAGATTGTGAGTGTGAATATTGAAAGTACAACGAGAATAACAAGAGCTGTTGTGGGGGGAATGATGGAAAGGAAAAAGGGTGCAATAGTAAATATTGGGTCTGGTGCTACAGTGGTTGTGCCTTCACATCCTCTCTTCACAATCTATGCTGCAACTAAAGCATATGTAGATCAGTTTTCAAGATCTTTGTATATGGAGTACAAACAGTACGGAATCCACGTGCAATGTCAGGTACCACTGTATGTTGCAACAAACATGGTATCAAGAGTAGCATCTATTGGAAGAGATTCTTTATTCATACCAACACCTGAAGGTTATGCAAGAGCCTCTATTCGTAAAATTGGGTATGAAACAAGGTGCACACCTTATTGGGCACACTCAATTCAGTGGGCATTTGCACGCTTAATCCCTGACCCACTTCTTGATTATTGGCGCATGTCCATTGGTTTGCGACGTAGGAGTAGTCACTAG 930 0.4065 MHQLEVLIIFLPFLLGLTLTFNHFITLIIWIVNTCLRSDKHLIKTYGSWALITGATDGIGKALAYQLAQKSLNLILVSRNSKKLETVKNEIITKHLHVHIKTITIDFSGDFTESLREIEVLARDLDLGILINNVGITYPKAMFFHEVKEELWMKIVSVNIESTTRITRAVVGGMMERKKGAIVNIGSGATVVVPSHPLFTIYAATKAYVDQFSRSLYMEYKQYGIHVQCQVPLYVATNMVSRVASIGRDSLFIPTPEGYARASIRKIGYETRCTPYWAHSIQWAFARLIPDPLLDYWRMSIGLRRRSSH 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04174 309 PRINTS Glucose/ribitol dehydrogenase family signature 49 66 IPR002347 -
Mepo2g04174 309 PRINTS Glucose/ribitol dehydrogenase family signature 202 221 IPR002347 -
Mepo2g04174 309 PRINTS Glucose/ribitol dehydrogenase family signature 174 190 IPR002347 -
Mepo2g04174 309 PRINTS Glucose/ribitol dehydrogenase family signature 125 136 IPR002347 -
Mepo2g04174 309 PRINTS Glucose/ribitol dehydrogenase family signature 223 240 IPR002347 -
Mepo2g04174 309 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 136 IPR002347 -
Mepo2g04174 309 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 180 188 IPR002347 -
Mepo2g04174 309 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 202 221 IPR002347 -
Mepo2g04174 309 Pfam short chain dehydrogenase 49 243 IPR002347 -
Mepo2g04174 309 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 47 301 IPR036291 -
Mepo2g04174 309 CDD 17beta-HSD1_like_SDR_c 47 290 - -
Mepo2g04174 309 PANTHER RH59310P 8 307 - -
Mepo2g04174 309 PIRSF 11-beta-HSD1 2 309 - -
Mepo2g04174 309 FunFam Hydroxysteroid (17-beta) dehydrogenase 3 43 274 - -
Mepo2g04174 309 Gene3D - 41 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04174 Mepo-Chr2 50636027 50641548 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04174 7 307 Lipid Metabolism Gene Families AT1G24470 56.811 2.23e-121 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04174 K10251 - mnt:21410235 388.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04174 2 50636027 50641548 Mepo2g04174 2 50636027 50641548 ECH
Mepo2g04174 2 50636027 50641548 Mepo3g06266 3 76781442 76784058 PCT