Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03425 ATGGCTTCATCAGAGATCGAAGTTGTTTCATCGGAACCGTCCAAGCCCCAAGAACAGCAGCTACCTCCCATACTCGACGTTTTCACTGCTTCCATCCATGGTGACCTTCAAAAATTGAGAATTTTCGTTGAACAAGACGGTGCCTCTGTTTCTAATCCCGATTTTAATGGCTATTATGCTCTTCAATGGGCTTCTCTCAATAACTTCCACCACATTGTTCACTATCTCATTCAGCATGGTGCCGATGTCAATGCTAAAGACCTCATGCTACAAACAGCTTTACATTGGGCAGCAGTTCGTGGTGCAACGGCAGCTGCTGATGTGCTCTTGGAGAATGGTGCTCGGGTTGAAGCTGCTGATATAAATGGATACAGGGCAGTTCATGTTGCTGCACAATATGGACAGACAGCTTTTCTAAATCACATTGTTGCAAAATACCATGCTGATTTTGATGTGCCTGATAATGATGGAAGGAGTCCTCTACATTGGGCTGCGTATAAGGGATTTGCTGATACAATAAGATTGCTTCTATTTAGAGATGCAAGTCAAGGAAGACAAGATAAAGATGGTGCTACCCCATTGCATTGGGCAGCATTAAGGGGACATTCAGAGGCATGTGCTGTGCTTGTGCATGCTGGGACAAAGGAAGAATTGACGGTGAAGGACAATGCAGGATTCACTCCTGTACAGCTTGCATATGATAAAGGTCATCAAAATGTCGCCCCTTTCCTTTCTAATCAACAACGGGCTCATAGCAACCACTGGAGAGGCAAACTTTATTGTGGGTTGGTGACAGATATTGGTTATGCTCCCATTTTATTGTGTATTATAGTCTTTCTCTCGATCCTCTTCATCAATTCAGTTGTTGCAGCTCCTAACCTTAAAAAGATTACCGCTGCTGTTGGATTTTGGTCATGGATAGCTCTCTCTTCATCTGCTGGTTCCTTGATTATGTTTTATAGGTGTAGTAGAGATCCAGGTTATATAAAACGGTCAGTAGACTTGGGTACTCTAAACGATGCAGAGGATCCTTTGCTGAATATTGAGCTGAATAGTTCCTCTGTTTGGACGGGAAATTGGTCCCAACTTTGCCCTACCTGCAAGATAATAAGACCTGTCCGATCTAAGCACTGCCCTACTTGTAAGCGTTGTGTAGAACAGTTCGACCACCATTGTCCATGGATATCTAATTGTGTTGGGAAGAGGAACAAAAGGGATTTCTTTATTTTTATCTGCTTGGGAACTATTACTTCTTCTGTTAGTGCCATCGTTGCAGTTCACAGAATTTGGACATCAATACCAGCATTACCAGCAGGAGAAACATGGATCCATCAGGTGTTAGTAAGACATCCGGGTCTTGTTGCATTTTTGGTGATGGACGCTGTTGTCGCCGTTGCAGCTACAACTTTGACAGTAACGCAGGCTTCCATGATAGCACGAAATGTGACCACAAACGAACTAGCGAATTCCACACGGTATGAGTATCTTCGTGGTCCTGATGGGCGGTTCAGAAACCCATATAATCATGGTTGGTGGAAGAATTGTGCTGATTTTCTTTTGCTGGGCCACACAGATGATGATGCTATTGCCTGGCCTCCATTACAGCAGGTGGCTACATAG 1620 0.4389 MASSEIEVVSSEPSKPQEQQLPPILDVFTASIHGDLQKLRIFVEQDGASVSNPDFNGYYALQWASLNNFHHIVHYLIQHGADVNAKDLMLQTALHWAAVRGATAAADVLLENGARVEAADINGYRAVHVAAQYGQTAFLNHIVAKYHADFDVPDNDGRSPLHWAAYKGFADTIRLLLFRDASQGRQDKDGATPLHWAALRGHSEACAVLVHAGTKEELTVKDNAGFTPVQLAYDKGHQNVAPFLSNQQRAHSNHWRGKLYCGLVTDIGYAPILLCIIVFLSILFINSVVAAPNLKKITAAVGFWSWIALSSSAGSLIMFYRCSRDPGYIKRSVDLGTLNDAEDPLLNIELNSSSVWTGNWSQLCPTCKIIRPVRSKHCPTCKRCVEQFDHHCPWISNCVGKRNKRDFFIFICLGTITSSVSAIVAVHRIWTSIPALPAGETWIHQVLVRHPGLVAFLVMDAVVAVAATTLTVTQASMIARNVTTNELANSTRYEYLRGPDGRFRNPYNHGWWKNCADFLLLGHTDDDAIAWPPLQQVAT 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03425 539 ProSiteProfiles Ankyrin repeat region circular profile. 189 213 - -
Mepo2g03425 539 MobiDBLite consensus disorder prediction 1 20 - -
Mepo2g03425 539 ProSiteProfiles Ankyrin repeat region circular profile. 156 182 - -
Mepo2g03425 539 SUPERFAMILY Ankyrin repeat 28 246 IPR036770 -
Mepo2g03425 539 ProSiteProfiles Ankyrin repeat region circular profile. 89 120 - -
Mepo2g03425 539 ProSiteProfiles DHHC domain profile. 362 412 - -
Mepo2g03425 539 ProSiteProfiles Ankyrin repeat profile. 189 221 IPR002110 GO:0005515
Mepo2g03425 539 Pfam Ankyrin repeats (3 copies) 33 119 IPR002110 GO:0005515
Mepo2g03425 539 Pfam Ankyrin repeats (3 copies) 128 214 IPR002110 GO:0005515
Mepo2g03425 539 Gene3D - 94 256 IPR036770 -
Mepo2g03425 539 ProSiteProfiles Ankyrin repeat profile. 56 88 IPR002110 GO:0005515
Mepo2g03425 539 ProSiteProfiles Ankyrin repeat profile. 89 121 IPR002110 GO:0005515
Mepo2g03425 539 Gene3D - 17 93 IPR036770 -
Mepo2g03425 539 PANTHER ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED 8 520 - -
Mepo2g03425 539 ProSiteProfiles Ankyrin repeat region circular profile. 56 87 - -
Mepo2g03425 539 MobiDBLite consensus disorder prediction 1 18 - -
Mepo2g03425 539 Pfam DHHC palmitoyltransferase 362 489 IPR001594 GO:0016409
Mepo2g03425 539 FunFam S-acyltransferase 11 142 - -
Mepo2g03425 539 FunFam S-acyltransferase 143 251 - -
Mepo2g03425 539 ProSiteProfiles Ankyrin repeat profile. 156 188 IPR002110 GO:0005515
Mepo2g03425 539 SMART ANK_2a 156 185 IPR002110 GO:0005515
Mepo2g03425 539 SMART ANK_2a 56 85 IPR002110 GO:0005515
Mepo2g03425 539 SMART ANK_2a 224 253 IPR002110 GO:0005515
Mepo2g03425 539 SMART ANK_2a 189 220 IPR002110 GO:0005515
Mepo2g03425 539 SMART ANK_2a 89 118 IPR002110 GO:0005515
Mepo2g03425 539 SMART ANK_2a 122 152 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03425 Mepo-Chr2 43950555 43958618 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03425 34 237 Miscellaneous Gene Families AT2G31820 26.761 4.26e-13 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03425 K20032 - gmx:100807263 919.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g03425 2 43950555 43958618 Mepo2g03425 2 43950555 43958618 ECH