Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03421 ATGGATTATCAGTATATTCTAGGAGGGATTTTGGCTTGTAGTTTGGCATTTGTGTTTGTTGTGTATAGTTTTGGAGAAAAGAAGAAAACAGGTTCAAGTTCAATGGATGTGAAAAGTAATGGATATGCAAAGACATCATCAGAAAATGGAGAGATTGTTGGAGAAACAGATATCATCATTGTAGGTGCTGGAGTTGCTGGTGCTGCTCTTGCCTATACACTTGGAAAGGATGGACGACGAGTACATGTGATTGAAAGAGACTTAACTGAGCCTGATAGAATTGTGGGTGAATTGCTACAACCTGGTGGCTATCTGAAGTTACTTGAGTTGGGTCTTGAGGATTGCGTGGATGAAATTGATGCTCAAAGAGTGTTTGGCTATGCACTTTATAAGGATGGGAAAAATACCAAACTGTCTTATCCCTTGGAAAAGTTTGACTCTGACGTATCTGGAAGAAGTTTTCACAATGGTCGATTCATACAAAGAATGCGAGAAAAGGCTTCATCTATTCCAAATGTTAAATTAGAACAAGGAACTGTTACATCGTTACTTGAAGAAAATGGAACTATCAAAGGTGTGAACTACAAAAATAAGAGTGGTCAAGAGTTCACAGCAAAGGCTCCTCTCACCATAGTATGTGATGGTTGTTTTTCCAACTTGAGGCGTTCTCTTTGTAATCCTAAGGTTGAAGTTTCCTCTCATTTTGTTGGAATGATTTTGGAGAATTGTAATCTTCCACATGCAAATCATGGTCATGTTATCTTGGGTGATCCTTCACCCATTTTGTTTTACCCTATAAGTAGTACTGAGATTCGCTGTTTGGTTGACGTGCCTACTGGCCAAAAATTACCTTCTCTTGGTAATGGTGAAATGGCAAATTATTTGAAAACTCTGGTAGCTCCCCAGGTTCCTCCAGAACTGCGAGCTTCTTTTATTGCAGCAGTTGATAAAGGAAACATAAGAAGCATGCCAAATAGAAGCATGCCTGCATCACCTTATCCCACCCCCGGGGCTCTTCTGATGGGAGATGCCTTCAATATGCGTCATCCTTTAACAGGAGGAGGAATGACTGTGGCTTTGTCTGACATTGTTTTGCTAAGGAATCTACTTAAACCTCTGCGTAATCTGCATGATCCTTCTGCTCTTTGCAATTACCTCGAGTCATTCTACACCCTACGCAAGCCAGTGGCATCTACAATAAACACATTAGCAGGTGCATTGTACAAAGTGTTTTGTGCATCTCCTGATCCAGCTAGCATTGAAATGCGCCGAGCATGTTTTGATTATTTGAGCCTTGGAGGTGTTTGCTCAGACGGACCAATAGCTCTACTCTCCGGTCTGAATCCACGTCCATTGAGCTTGGTTTTACATTTCTTCGCGGTGGCTGTATACGGTGTTGGCCGCCTCCTGATACCGTTTCCTTCTCCAAAACGAATGTGGATCGGAGCTAGATTGATTTCTGGTGCATCAAGTATCATTTTCCCCATTATCAAGGCTGAAGGAGTGAGACAAATGTTTTTTCCAGCAAGTGTGCCAGCATATTACAGAATGCCTCCTGTCCATTAA 1566 0.4163 MDYQYILGGILACSLAFVFVVYSFGEKKKTGSSSMDVKSNGYAKTSSENGEIVGETDIIIVGAGVAGAALAYTLGKDGRRVHVIERDLTEPDRIVGELLQPGGYLKLLELGLEDCVDEIDAQRVFGYALYKDGKNTKLSYPLEKFDSDVSGRSFHNGRFIQRMREKASSIPNVKLEQGTVTSLLEENGTIKGVNYKNKSGQEFTAKAPLTIVCDGCFSNLRRSLCNPKVEVSSHFVGMILENCNLPHANHGHVILGDPSPILFYPISSTEIRCLVDVPTGQKLPSLGNGEMANYLKTLVAPQVPPELRASFIAAVDKGNIRSMPNRSMPASPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVLLRNLLKPLRNLHDPSALCNYLESFYTLRKPVASTINTLAGALYKVFCASPDPASIEMRRACFDYLSLGGVCSDGPIALLSGLNPRPLSLVLHFFAVAVYGVGRLLIPFPSPKRMWIGARLISGASSIIFPIIKAEGVRQMFFPASVPAYYRMPPVH 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03421 521 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 57 79 - -
Mepo2g03421 521 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 350 366 - -
Mepo2g03421 521 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 335 350 - -
Mepo2g03421 521 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 206 221 - -
Mepo2g03421 521 PANTHER SQUALENE MONOOXYGENASE 8 519 IPR040125 GO:0004506|GO:0016126
Mepo2g03421 521 FunFam Squalene monooxygenase 2 50 431 - -
Mepo2g03421 521 Pfam Squalene epoxidase 206 480 IPR013698 GO:0004506|GO:0016020|GO:0050660
Mepo2g03421 521 Gene3D - 52 422 IPR036188 -
Mepo2g03421 521 SUPERFAMILY FAD/NAD(P)-binding domain 55 432 IPR036188 -
Mepo2g03421 521 Pfam NAD(P)-binding Rossmann-like domain 60 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03421 Mepo-Chr2 43919204 43923176 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03421 22 519 Miscellaneous Gene Families AT1G58440 77.600 0.0 801
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g03421 K00511 - gmx:100808856 905.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g03421 2 43919204 43923176 Mepo2g03421 2 43919204 43923176 ECH