Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02872 ATGGCTAGCGGCAGCAACTCCTCTTCTTTAGCTCTGGTGACGATGCCAAAGAAGAAAAAAAAAATTTATGACGTGTTTGTGAGCTTCAGAGGTGAAGATACTCGCAACAACTTCACTGATTTCCTTTTTGATGCCCTCGATGAGAAAGGTGTTTTGGCATTTAGGGATGACACTAATCTTCAAAAAGGTGAATCCATAGCACCTGAACTCTTTCATGCAATCGAAGGGTCTCAGGTTTTTGTTGTCGTCTTGTCAAAGAACTACGCTTTCTCAACTTGGTGCTTGAAAGAATTGGAATACATCCTATGTTGTGTTCAAGCATCTAAAAAACATGTTCTGCCTGTGTTCTATGATGTTGATCCTTCTGTGGTGCGAAAGCAAAGTGAGATTTATAGTGAAGCATTTATCCAACATGAACACAAATTCCAACAAGATTCTCAAATGGTGCTAAGATGGAGGGCGGCTCTGACACAAGTCGCTGATCTCTCTGGTTGGGATATACGTGATAAGTAA 513 0.4094 MASGSNSSSLALVTMPKKKKKIYDVFVSFRGEDTRNNFTDFLFDALDEKGVLAFRDDTNLQKGESIAPELFHAIEGSQVFVVVLSKNYAFSTWCLKELEYILCCVQASKKHVLPVFYDVDPSVVRKQSEIYSEAFIQHEHKFQQDSQMVLRWRAALTQVADLSGWDIRDK 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02872 170 PANTHER TMV RESISTANCE PROTEIN N-LIKE 9 169 - -
Mepo2g02872 170 FunFam Disease resistance protein (TIR-NBS-LRR class) 19 170 - -
Mepo2g02872 170 Gene3D - 17 170 IPR035897 -
Mepo2g02872 170 SMART till_3 22 162 IPR000157 GO:0007165
Mepo2g02872 170 SUPERFAMILY Toll/Interleukin receptor TIR domain 20 165 IPR035897 -
Mepo2g02872 170 ProSiteProfiles TIR domain profile. 21 170 IPR000157 GO:0007165
Mepo2g02872 170 Pfam TIR domain 23 158 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02872 Mepo-Chr2 38509203 38510409 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02872 1 164 Miscellaneous Gene Families AT5G45220 29.518 1.71e-11 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02872 - - tpra:123895013 256.529