Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02870 ATGCGTGCCCCTATTGCTAGAAAACTATGCACTCTCAGCTCCAATTTTCGTTCACATTTACAAAACAATGCAAAGAAAAACCTTTCATCTCTCAAAATTTCACCTCTTTATGAAGAAACCCATCATCATTTTCATTCTGACTTGAACCTATCAACCCTCAAACACAATCATGTTCCACCCCCAGATGCAGAGGAGGATTTCTCTGGCTCTGATTATCAGCTTTCTAGCATATTGACCTCCTCTTCGGCAGAGAAGGTTGACTGTGAGGGAGTTGATGATGAAGAAAAGGAGAAAAGGGTTGTGGAGATACCGCTGATACGGGACATTCTTCATAGTGATTTATCAAAGAAACGGAATGAATCGTCTCGTGAGCGGAAACACAAATGGATTTTCAAAGACACTGGTGGTGAACGATCTGACCGGTTACTCAAAATATGTGCAAAAAAACTAGGAACGACTACTACTGTAGATGTGTTTGGCCACTTGGGTCGAGAAACTGGTGTGAAAGAGTATAATGGATTGATCAAGTTGTGCATAAAGAAGGTCAGGGAGACTAATGATGAAAACGTCTGTATAGAAGAAATGAATAAGATTTATAATCTTTTTAAATTAATGAGGGAATGTGGGTTTCAGCTAGAAGAGCAAACATATCGTCCACTTTTTGAGTATATAATTGACATGGGCTTTGTTCAAGAATTTGAACTTTTCTATGATGTTATCAAAGCCGGTAATCCCAGTTCAATTTCACGATTGGGTTACTATGAAATGTTGCTGTGGATAAGGGTTAACAATGAAGAAATGATCCGGGATATTTGCGAATACATTACTGTGGAAGAGAGTAAAGACACTTCTGCTTTACGAGAAAGTTACTTATTGGCTCTCTGTGAAAGTGACCGCAAGACACAGATTTTGGACGTGTTGAAAAATATAGACATAACAAAGCTTAAATCTGCAAAATCTATATCAAATATATTCCAATCATTGGGAAGGCTACTGCTGGAATCAGAAGCGGAGAGTTTACTTTTGGATTTGAGAGCATGTGATTACGATGCAGATAAAATTTCAAACTTCATTGCTAGTTATGCGGTTAGCATTCCAAATTTAGAGGTTGAGGATATGGTCTCAAAAATCAAGAATTTGCATGATGTGTTGGAAGTTTTGCTATCATCATCAGCGTATGAAAAGCTCATTCTGTATTGCTGTGGTATGCACAAGGTGGATGTAGCTCTTGATATTGTTGATAAAATGTGTCAAGCAGGCTTTGAGCTGGCTACTCATGTGTTACAATCCATATTACAGATTTGCGAGGAAGCTTATGATTATATTTTGGTCCATCGAATCTGTTCCATCATAAGGTGCCATCATCACTATTTGCAGTTAAATGGCGAAATATGCAGGTGTTTGGTGCACTTTTGTGTAAGGTTAAAAGATTTTGAACGTGCATACGAGATGGTTAATGAATTGCATGAATTGGGTTTCAAACCTACGACAGCCATGTACAATGCCATAATGGCAGGATATTTTCGTGAGAAAAACATCAGTGGTGCCTTGAGGGTCCTCAAGCACATGCAAGAGGCCAACGTAAAGCCTGATTCACAGACTTTCAGCTATTTGATTGGAAATTGTGAAACAAAAGATGATATAGATATGTATCGTGATGAACTGACGCAATCTAAAATCAAACCTACAAAACAAATTTATATGGCCTATATTAATGCATATGCAGCTTGTGGCGAATTCGAGAAGGCAAAAAAGGTAGTTGATGATCAAACAATACCACCGAAGAGCATAAATGAAATCAAGAGTGTCCTTGTCTCAGCTCTTGCATCTCATGGGCAATTGTCTGAGGCACTTGTTATCTATGAGGAGATCAAGAAAGCTGGTCACAACTTGGAGCCAAAAGCTGTTATAAGTCTCATTGATGCGATGCGTTATCGAAGTGGAGAGTTGGACAGGTTGCTTCTTCTACTCATGGATTTAAGTGATCAAAATTGGTGGGTTGATGGTTGTTTCAGGGTTATACAGTACTGTATTCAGAACAATCATTTAAGTACCACTGTTGACCTGTTAAAGCAACTCAAGGATACTTTCAAAAGTGATGAAACAATGACAGAAGTTCTTTTCGATGCAGCGTATTCTCTAATTGCGGGATGCGAGTCCGCACGTTTGCAGTTTGGCCTGGATTTGCTTTGGGCAATCAAAGATGAGCTTGGCCTTGTTCCTTCAAGGCAGTGTCTTGATTTTCTCCTAAGAGCTTGTGCCATTTCAGGAGATTTGAATAATGCTCGTTTGATTTGGAGAGAATATGAGGTTGCTGGATTTCCTTACAATGTATTAAGTTATTTGAGGATGTATCAAGCACTTTTGGCATCAGGAGATCACAGATATGCTGACTTTATACTCAAGAAAATTCCAAGAGATGACGCTGATGTTTGTTCTATCATCTTAGAATGTCAAAAAACTTACGGCGATAATGTTAAACCATGTGAAAATGTTAAATCAGTAGAAGGGGATAAGAAGAAAAAGAGTCCTAAATCTGTAGGAGACGACAAGAAGAAGAAAGAGAAGAAGAAAAAGAAAAAGAAAGAAACAGGAAATAAAGAAAAAAGTAAGGTTTGA 2619 0.383 MRAPIARKLCTLSSNFRSHLQNNAKKNLSSLKISPLYEETHHHFHSDLNLSTLKHNHVPPPDAEEDFSGSDYQLSSILTSSSAEKVDCEGVDDEEKEKRVVEIPLIRDILHSDLSKKRNESSRERKHKWIFKDTGGERSDRLLKICAKKLGTTTTVDVFGHLGRETGVKEYNGLIKLCIKKVRETNDENVCIEEMNKIYNLFKLMRECGFQLEEQTYRPLFEYIIDMGFVQEFELFYDVIKAGNPSSISRLGYYEMLLWIRVNNEEMIRDICEYITVEESKDTSALRESYLLALCESDRKTQILDVLKNIDITKLKSAKSISNIFQSLGRLLLESEAESLLLDLRACDYDADKISNFIASYAVSIPNLEVEDMVSKIKNLHDVLEVLLSSSAYEKLILYCCGMHKVDVALDIVDKMCQAGFELATHVLQSILQICEEAYDYILVHRICSIIRCHHHYLQLNGEICRCLVHFCVRLKDFERAYEMVNELHELGFKPTTAMYNAIMAGYFREKNISGALRVLKHMQEANVKPDSQTFSYLIGNCETKDDIDMYRDELTQSKIKPTKQIYMAYINAYAACGEFEKAKKVVDDQTIPPKSINEIKSVLVSALASHGQLSEALVIYEEIKKAGHNLEPKAVISLIDAMRYRSGELDRLLLLLMDLSDQNWWVDGCFRVIQYCIQNNHLSTTVDLLKQLKDTFKSDETMTEVLFDAAYSLIAGCESARLQFGLDLLWAIKDELGLVPSRQCLDFLLRACAISGDLNNARLIWREYEVAGFPYNVLSYLRMYQALLASGDHRYADFILKKIPRDDADVCSIILECQKTYGDNVKPCENVKSVEGDKKKKSPKSVGDDKKKKEKKKKKKKETGNKEKSKV 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02870 872 Gene3D Tetratricopeptide repeat domain 454 552 IPR011990 GO:0005515
Mepo2g02870 872 MobiDBLite consensus disorder prediction 831 851 - -
Mepo2g02870 872 Pfam PPR repeat 603 628 IPR002885 -
Mepo2g02870 872 Pfam PPR repeat 567 588 IPR002885 -
Mepo2g02870 872 Pfam Pentacotripeptide-repeat region of PRORP 393 538 IPR033443 -
Mepo2g02870 872 Gene3D Tetratricopeptide repeat domain 139 453 IPR011990 GO:0005515
Mepo2g02870 872 PANTHER OS02G0132600 PROTEIN 7 849 - -
Mepo2g02870 872 SUPERFAMILY TPR-like 452 650 IPR011990 GO:0005515
Mepo2g02870 872 NCBIfam pentatricopeptide repeat 464 496 IPR002885 -
Mepo2g02870 872 NCBIfam pentatricopeptide repeat 499 532 IPR002885 -
Mepo2g02870 872 MobiDBLite consensus disorder prediction 829 872 - -
Mepo2g02870 872 MobiDBLite consensus disorder prediction 852 866 - -
Mepo2g02870 872 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 461 495 IPR002885 -
Mepo2g02870 872 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 496 530 IPR002885 -
Mepo2g02870 872 Gene3D Tetratricopeptide repeat domain 672 872 IPR011990 GO:0005515
Mepo2g02870 872 Gene3D Tetratricopeptide repeat domain 553 671 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02870 Mepo-Chr2 38487337 38499688 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02870 468 804 Glycosyltransferase AT1G05670 20.170 5.12e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02870 - - tpra:123908063 1238.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g02870 2 38487337 38499688 Mepo2g02870 2 38487337 38499688 ECH