Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02609 ATGGCTACCATCAATGGGAACACTGATGCTGCTCAACCGATTGTTCCTCCAACAAAACAACCTCTTCCTCCTCCTAAGTCCGTTGATTCCACCTCTGTTCTCAAAAGGTTGCAGTCTGAATTGATGTCATTGATGATGAGTGGTGATTCTGGTATATCTGCTTTTCCTGAGGAAGACAACATATTCTTGTGGAAAGGAACAATAACAGGAAGCAAAGAGACAGTGTTTGAAGGCACAGATTACAAGTTGTCACTTTCTTTTCCTAATGATTATCCTTTTAAGGCTCCTAAAGTCAAGTTTGAAACTACCTGCTTCCATCCAAATGTTGATCTTCATGGCAATATATGCTTGGACATACTTCAGGATAAATGGTCATCTGCTTATGATGTCAGAACAATTCTACTATCCATACAAAGTCTTCTTGGAGAGCCAAACATTAGTTCACCACTAAATCCACAAGCAGCACAGCTTTGGAGCAATCAAGAAGATTACAGGAAGATGGTGGAGAAGTTGTACAAATCTCCAAGTGCTACTGCTTAG 540 0.4037 MATINGNTDAAQPIVPPTKQPLPPPKSVDSTSVLKRLQSELMSLMMSGDSGISAFPEEDNIFLWKGTITGSKETVFEGTDYKLSLSFPNDYPFKAPKVKFETTCFHPNVDLHGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNPQAAQLWSNQEDYRKMVEKLYKSPSATA 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02609 179 FunFam ubiquitin-conjugating enzyme E2 20 26 174 - -
Mepo2g02609 179 SUPERFAMILY UBC-like 30 172 IPR016135 -
Mepo2g02609 179 CDD UBCc 35 172 IPR000608 -
Mepo2g02609 179 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 32 177 IPR000608 -
Mepo2g02609 179 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 34 169 - -
Mepo2g02609 179 Gene3D Ubiquitin Conjugating Enzyme 26 177 IPR016135 -
Mepo2g02609 179 SMART ubc_7 35 177 - -
Mepo2g02609 179 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 105 120 IPR023313 -
Mepo2g02609 179 Pfam Ubiquitin-conjugating enzyme 36 170 IPR000608 -
Mepo2g02609 179 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02609 Mepo-Chr2 35791157 35793468 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02609 34 141 Miscellaneous Gene Families AT3G17000 31.858 7.25e-12 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02609 K06688 - gmx:100305664 304.293