Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02583 ATGGGAGATGAAGGTATAGTGAGAGGTGTCACAAAACAGGTTACCCCCGGGAAGGCTACTATATTGGCTCTTGGCAAAGCTTTCCCTCACCAGCTTGTGATGCAAGAGTATTTAGTTGATGGATATTTTAGAGACACAAATTGTGATAATCCTGAGCTTAAGCAAAAACTGGCTAGACTTTGCAAGACAACCACAGTGAAAACAAGGTACGTTGTTATGAATGAGGAGATACTTAAAAAGTATCCCGAACTTGCTGTTGAAGGCGCCTCCACCGTAAAACAACGTCTAGAGATATGTAACGAGGCGGTGACACAAATGGCAATTGAGGCTTCCCAGGTTTGCATAAAGAATTGGGGTGGACCTTTATCGGACATAACTCATGTGGTTTATGTTTCATCCAGTGAAGCTAGGCTACCAGGCGGTGACCTTTACCTATCAAAAGGACTAGGACTAAACCCTACTATTCGACGAACCATGCTCTATTTTTCTGGATGCTCAGGAGGTGTGGCTGGTCTACGCGTTGCGAAAGACATAGCTGAGAACAACCCTGGAAGTAGAGTTTTGCTAGCTACTTCTGAGACTACAATTATTGGATTCAAGCCACCAAGTGCTGATAGACCTTATGATCTTGTTGGTGTAGCACTCTTTGGAGATGGTGCTGGTGCTATGATAATTGGCTCAGACCCAAAATTGGAAACTGAGATCCCATTATTTGAGCTTCACACTTCAGCTCAGGAGTTTATACCAGACACGGAGAAGAAAATTGATGGGAGGTTGACAGAGGAAGGGATAAGCTTCACGTTGGCGAGGGAACTTCCTCAGATCATTGAAGACAATATTGAGGGATTCTGTGACAGACTAATGGATGCTGTTGAGTTGGAGAATAAGGAGTATAATAAGTTGTTTTGGGCTGTGCATCCAGGAGGGCCTGCGATATTGAATCGCGTGGAGAAACGACTTGAGTTGTCGCCAGAGAAGCTGAATGCTAGTAGGAAAGCTCTTATGGATTATGGAAATGCTAGCAGCAATACCATTATTTATGTGCTTGATTATATGCTAGATGAGAGCAAGAAGATTAGAAAGGAAGGAGGAGATCCTGAATGGGGTCTGATACTTGCTTTTGGACCTGGAATTACTTTTGAGGGGATTCTAGCAAGGAACCTATGCCCTTGA 1173 0.4373 MGDEGIVRGVTKQVTPGKATILALGKAFPHQLVMQEYLVDGYFRDTNCDNPELKQKLARLCKTTTVKTRYVVMNEEILKKYPELAVEGASTVKQRLEICNEAVTQMAIEASQVCIKNWGGPLSDITHVVYVSSSEARLPGGDLYLSKGLGLNPTIRRTMLYFSGCSGGVAGLRVAKDIAENNPGSRVLLATSETTIIGFKPPSADRPYDLVGVALFGDGAGAMIIGSDPKLETEIPLFELHTSAQEFIPDTEKKIDGRLTEEGISFTLARELPQIIEDNIEGFCDRLMDAVELENKEYNKLFWAVHPGGPAILNRVEKRLELSPEKLNASRKALMDYGNASSNTIIYVLDYMLDESKKIRKEGGDPEWGLILAFGPGITFEGILARNLCP 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02583 390 SUPERFAMILY Thiolase-like 13 231 IPR016039 GO:0016746
Mepo2g02583 390 SUPERFAMILY Thiolase-like 236 386 IPR016039 GO:0016746
Mepo2g02583 390 PIRSF PKS_III 7 389 IPR011141 GO:0009058|GO:0016747
Mepo2g02583 390 Gene3D - 237 387 IPR016039 GO:0016746
Mepo2g02583 390 Pfam Chalcone and stilbene synthases, C-terminal domain 239 388 IPR012328 -
Mepo2g02583 390 FunFam Chalcone synthase 2 4 236 - -
Mepo2g02583 390 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 12 388 IPR011141 GO:0009058|GO:0016747
Mepo2g02583 390 Pfam Chalcone and stilbene synthases, N-terminal domain 11 229 IPR001099 -
Mepo2g02583 390 Gene3D - 4 236 IPR016039 GO:0016746
Mepo2g02583 390 CDD CHS_like 19 384 - -
Mepo2g02583 390 FunFam Chalcone synthase 1 237 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02583 Mepo-Chr2 35508420 35509876 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02583 149 378 Acyl Lipid Metabolism Gene Families AT1G71160 26.437 1.88e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02583 - - vun:114168705 660.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g02583 2 35508420 35509876 Mepo2g02583 2 35508420 35509876 ECH