Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02555 ATGCGAGGCTTATTGGGAATCACAAAAACCTTGTTCAACGGAACAAAATCTTCATTCTCACCATGCAGAAATCGTGCATACAGTCTGATCCCAATGGTGATAGAAACTTCTTCACGAGGAGAAAGAGCCTACGATATCTTCTCTCGTCTTCTCAAAGAACGCATCGTTTGCATCAATGGTCCTATCTCTGATGATACTGCTCATGTTGTTGTTGCTCAGCTTTTGTTTCTTGAATCTGAAAACCCTTCCAAACCTATCAACATGTATCTCAATTCTCCTGGTGGTGCTGTTACTGCAGGGCTTGCAATATATGATACTATGCAGTACATTCGGTCTCCGATCAACACAATCTGTTTGGGTCAGGCTGCATCCATGGGTTCTCTTCTGTTGTGTGCAGGTGCCAAGGGTCAGAGGCGTGCTCTTCCGAATGCTACAATCATGATTCACCAGCCTTCTGGTGGGTACAGTGGCCAGGCAAAGGATATTGCAATTCATACCAAGCAGATTGTTCGAATGTGGGATGCGTTAAATGAGCTGTACGTCAAGCACACTGGCCAACCACTTGACGTAATTCAGAAGAATATGGATAGGGATTACTTTATGACTGCTGAAGAGGCAAAGGAGTTTGGGATTATTGATGAAGTTATTGATCAGAGACCTATGACTTTGGTTTCTGATGCTGTTGCTGATGAAGGCAAAGATAAAGGTTCCAATTAG 717 0.4351 MRGLLGITKTLFNGTKSSFSPCRNRAYSLIPMVIETSSRGERAYDIFSRLLKERIVCINGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLCAGAKGQRRALPNATIMIHQPSGGYSGQAKDIAIHTKQIVRMWDALNELYVKHTGQPLDVIQKNMDRDYFMTAEEAKEFGIIDEVIDQRPMTLVSDAVADEGKDKGSN 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02555 238 ProSitePatterns Endopeptidase Clp serine active site. 116 127 IPR018215 -
Mepo2g02555 238 PRINTS Clp protease catalytic subunit P signature 85 105 IPR001907 GO:0004176|GO:0004252|GO:0006508
Mepo2g02555 238 PRINTS Clp protease catalytic subunit P signature 116 133 IPR001907 GO:0004176|GO:0004252|GO:0006508
Mepo2g02555 238 PRINTS Clp protease catalytic subunit P signature 137 156 IPR001907 GO:0004176|GO:0004252|GO:0006508
Mepo2g02555 238 PRINTS Clp protease catalytic subunit P signature 45 60 IPR001907 GO:0004176|GO:0004252|GO:0006508
Mepo2g02555 238 PRINTS Clp protease catalytic subunit P signature 194 213 IPR001907 GO:0004176|GO:0004252|GO:0006508
Mepo2g02555 238 FunFam ATP-dependent Clp protease proteolytic subunit 28 220 - -
Mepo2g02555 238 CDD S14_ClpP_2 45 215 IPR001907 GO:0004176|GO:0004252|GO:0006508
Mepo2g02555 238 Gene3D - 18 223 - -
Mepo2g02555 238 Hamap ATP-dependent Clp protease proteolytic subunit [clpP]. 29 219 IPR001907 GO:0004176|GO:0004252|GO:0006508
Mepo2g02555 238 Pfam Clp protease 39 218 IPR023562 -
Mepo2g02555 238 ProSitePatterns Endopeptidase Clp histidine active site. 138 151 IPR033135 -
Mepo2g02555 238 SUPERFAMILY ClpP/crotonase 38 220 IPR029045 -
Mepo2g02555 238 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 23 223 IPR023562 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02555 Mepo-Chr2 35245910 35248765 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02555 K01358 - rvl:131324829 398.667