Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02536 ATGGAAGAGATTAACCAGAAGGAGGAGGAAGATCATCCAAGGGCGATAGAAGACAGCGACGACACAAGGTATGACGTGGAAGAGAACGGAGAAGAAGAAGACGCGTCAGAGAATGAAGAAGAAGAAGAAGAAGAAGAAAACGATACTGTGGATGAAGATGATCAATTCATCTTCGGCGCCGGTGTAAATCCTTTGGACTTCGTTCGTAACAATGATTCCGGTGTTAATTTGTACCAGAAATTTAAAGATTACCACCAGAAATCCATAGAATACCGTGCTCTCGATAACAGAAAGCGAAAACTACCCCTGCTACCTCACCGTGAAGAGAGTTCTTCTAAGAAGGCAAGGGAAGATGATATTTTTGGGGTAAACCCAGCTGAGGTTGAGGAATTTATCAATTTTGGAGAGGGCAAGAGACCAAGAAAGAAGAGGTCAAAAAAAAGAGGTAGGCAAAAAGGATCAAAGAAGAAACTTGACGAAAAGATATCGCAGATGTTGGGTGATGCCTACGTTCACTATGCAAATGGCCGTTATAAAATGGCTATATCTGTATTGCATGAAGTTGTCAGGCTGGAACCAAATTTACCTGACTCGTATCACACCCTTGGACTTGTCCATGGTGCAATTGGGGATCACGAAAATGAAATGGGTTTTTACATGATTACTGCTCATTTGACTCCAAAAGATCCAACGCTTTGGAAGACGCTTTATGTGTGGTCCATAGAACAAGATGATATTGGTCAAGCCAGTTATTGTATTTCGAAAGCAATAAAAGCAGACCCCCAAGATAGTAGTCTTAGGAGTCATCAAGCAATGCTTTATGCTGAAAGTCAAAATTATCAAAAAGCTGCTGAGGCATATGAACAAGTATATCAACTTTGTTGTGAAAATGTTGATGCACTAAAAGCAGCAGCTAAGTACTACCAAAAGTGTGGTCAAGTTGAACACTCAATTTGCATTCTTGAAGACTATCTGAAGAATAAACCAGATGGAGTAAATGCAAGTGTAGTTGATCTACTTGGTGCCATATTGATGGAAATAAAGGCGCATGACAGAGCTCTTCAGTACATAGAACAATCTCAAGTGGTTGGAAAAGAATTGCCCTTAAATTTGAAAGTTAAAGCTGGAATCTGCCATGTTCATCTTGGAAACTTGGAAATGGCTCAGGTTTTTTTCAATGATTTGAAACCAGAGAATGCAAGCAAGCATGTTGAGTCGATCACCGAGGTCGCAGACTCATTTATGGGTCTTGGACATTATAATTCTGCATTGAATTATTTTAAGATGTTGGAAGGAAATAGTAAAAATGAAGATGGTCTTCTGTATCTGAAAATTGCTAGATGTTATCAAGCGTTGGGAGAAAGGAAACAAGCAATTATCTCTTTTTACAAAGTCCTAGAAACACTACAAGATGATGTTGAAGCACGCATAACTTTGGCTTCCCTTCTAGTTGAGGAGGGGAAAGAAAATGAAGCCATTTCCTTGCTGTCTCCTCCAAAGGAATCTGACTCTGGTGAAGCACATTCTGAAAAGCCAAATAGATGGTGGGTTGATGTGAGAATAAAACTTAAGCTCTGTAACATATTTCAGATCAGAGGGATGCTTACTGATTTTGTGGATGTATGTTTCCCTTTGGTACGTGAATCTTTGAATGTTGCAACTCCTAAACGAAAGAGCAAACCGTTGCTACAGGGCAAATCAAAGAAGAAGCGTCTCTCCAAAAGTGATCTGCTTAAAAGGGTAGAGAAACTTGCTGCTCCGGAAACAGATAGTGTATTTCGAGGATTCAAGAATGTAGCCACATCAGCTGATCGGTTGAAGGCTTCCAGAGCAAAAAAGTTGCTTGAGGAAAAGGCAATTGAGAAGGAGAAAAGGAAAGCCGAGGCAGTGGCCTCTGGAATTGACTGGCGAAGTGATGACTCGGATGATGAGCTTCAGATACCAAACACAGAATCTCCCTTGTGTAATCTTCACAAAGATGAAGGATATCCCCAGCTAATCATTGATTTGTGCAATGCATTAGCATCCTTGCAAATGTATAGGGAAGCATTAGAGATTATCAATCTCTCTCTGAAATCGGCTCATATTTCTCTGTCTGCTGAGAAGAATGAGAAGCTTCGATCTCTTGGAGTTCAAATGGCATACAGCACCCCAGATCCTAAACAAGGCTTTGATTGTGTAAAAGGCATCGTTAAACAACATGCACAGAGTGTTGCAGCTTGGAATTGCTACTACAAGGTCATCTCAAGATTGGAAAACCGAGATACAAGACATGACAAATTTTTACGTGGTATGCAAGGAAAATTTGTGGATTGTGTGCCTCCTATCCTCATTTCTGCACATCAGTTTACTTTATGTAGCCATCATCAAGACGCGGCAAGGAAATACCTTGAAGCTTATAAACTTTTGCCCAAGAATCCATTGGTTAATCTTTGTGTTGGAACGGCCTTGATCAACTTGGCGCTGGGTTTCAGACTTCAAAATAAGCATCAGTGTGTTGTACAAGGCTTAGCATTCCTCTACAATAATTTGGAGATCTGTAAGAGCAGCCAGGAATCTACTGAACTAATTGATTGCCCAGCCTTACAGGAGTCTTTGTATAACATAGCTCGGGCATACCATCATGTTGGTCTTGTAACACTGGCAGCAATATATTATGAGAAGGTGATTGCTATTAGGGAGAGAGACTATCCAATTCCAAAATTTGCAAATGAGAATATTGACGTCAATGAAAATCACAAACCTGGTTACTGCAACCTTCGCAGAGAGGCAGCTTACAATCTACATTTAATCTACAAAAAGAGTGGTGCTCTCGATCTTGCTAGACAAGTTTTGAAAGATTATTGTTCCGTTTGA 2856 0.4034 MEEINQKEEEDHPRAIEDSDDTRYDVEENGEEEDASENEEEEEEEENDTVDEDDQFIFGAGVNPLDFVRNNDSGVNLYQKFKDYHQKSIEYRALDNRKRKLPLLPHREESSSKKAREDDIFGVNPAEVEEFINFGEGKRPRKKRSKKRGRQKGSKKKLDEKISQMLGDAYVHYANGRYKMAISVLHEVVRLEPNLPDSYHTLGLVHGAIGDHENEMGFYMITAHLTPKDPTLWKTLYVWSIEQDDIGQASYCISKAIKADPQDSSLRSHQAMLYAESQNYQKAAEAYEQVYQLCCENVDALKAAAKYYQKCGQVEHSICILEDYLKNKPDGVNASVVDLLGAILMEIKAHDRALQYIEQSQVVGKELPLNLKVKAGICHVHLGNLEMAQVFFNDLKPENASKHVESITEVADSFMGLGHYNSALNYFKMLEGNSKNEDGLLYLKIARCYQALGERKQAIISFYKVLETLQDDVEARITLASLLVEEGKENEAISLLSPPKESDSGEAHSEKPNRWWVDVRIKLKLCNIFQIRGMLTDFVDVCFPLVRESLNVATPKRKSKPLLQGKSKKKRLSKSDLLKRVEKLAAPETDSVFRGFKNVATSADRLKASRAKKLLEEKAIEKEKRKAEAVASGIDWRSDDSDDELQIPNTESPLCNLHKDEGYPQLIIDLCNALASLQMYREALEIINLSLKSAHISLSAEKNEKLRSLGVQMAYSTPDPKQGFDCVKGIVKQHAQSVAAWNCYYKVISRLENRDTRHDKFLRGMQGKFVDCVPPILISAHQFTLCSHHQDAARKYLEAYKLLPKNPLVNLCVGTALINLALGFRLQNKHQCVVQGLAFLYNNLEICKSSQESTELIDCPALQESLYNIARAYHHVGLVTLAAIYYEKVIAIRERDYPIPKFANENIDVNENHKPGYCNLRREAAYNLHLIYKKSGALDLARQVLKDYCSV 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02536 951 FunFam General transcription factor 3C polypeptide 3 568 950 - -
Mepo2g02536 951 Gene3D Tetratricopeptide repeat domain 369 498 IPR011990 GO:0005515
Mepo2g02536 951 SMART tpr_5 439 472 IPR019734 GO:0005515
Mepo2g02536 951 SMART tpr_5 334 367 IPR019734 GO:0005515
Mepo2g02536 951 SMART tpr_5 264 297 IPR019734 GO:0005515
Mepo2g02536 951 SMART tpr_5 196 229 IPR019734 GO:0005515
Mepo2g02536 951 SMART tpr_5 863 896 IPR019734 GO:0005515
Mepo2g02536 951 SMART tpr_5 162 195 IPR019734 GO:0005515
Mepo2g02536 951 PANTHER TRANSCRIPTION INITIATION FACTOR IIIC TFIIIC , POLYPEPTIDE 3-RELATED 9 950 IPR039340 GO:0006383
Mepo2g02536 951 MobiDBLite consensus disorder prediction 22 53 - -
Mepo2g02536 951 SUPERFAMILY TPR-like 403 943 IPR011990 GO:0005515
Mepo2g02536 951 MobiDBLite consensus disorder prediction 139 154 - -
Mepo2g02536 951 Gene3D Tetratricopeptide repeat domain 154 366 IPR011990 GO:0005515
Mepo2g02536 951 MobiDBLite consensus disorder prediction 1 21 - -
Mepo2g02536 951 MobiDBLite consensus disorder prediction 134 159 - -
Mepo2g02536 951 SUPERFAMILY TPR-like 170 495 IPR011990 GO:0005515
Mepo2g02536 951 Coils Coil 26 53 - -
Mepo2g02536 951 Pfam Tetratricopeptide repeat 864 894 IPR019734 GO:0005515
Mepo2g02536 951 Pfam Tetratricopeptide repeat 442 467 IPR019734 GO:0005515
Mepo2g02536 951 Gene3D Tetratricopeptide repeat domain 610 950 IPR011990 GO:0005515
Mepo2g02536 951 MobiDBLite consensus disorder prediction 1 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02536 Mepo-Chr2 35036322 35052999 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02536 K15201 - gmx:100804533 1193.33